fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G27950.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm040028 not found in 321aa AT4G27950.1 1st_1st 0.293132328 Ib
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G27950.1     MMMDEFMDLRPVKYTEHKTVIRKYTKKSSMERKTSVRDSARLVRVSMTDRDATDSSSDEE
gm040028_Glyma1 --MEQQNSIL-CKYTEHQTVMKKH-----MKSKDNTFCSPKVISISLIDPYATDSSSDEE
                  *::  .:   *****:**::*:     *: * ..  *.::: :*: *  *********

AT4G27950.1     EFLFPRRRVKRLINEIRVEPSSSSTGDVSASPTKDRKRINVD-STVQKPSVSGQNQ-KKY
gm040028_Glyma1 NVM-RRRRVKRYVNRIELQP--------AFKPVTTRKRHAGDAATLRKPPAKVTNSCRKF
                :.:  ****** :*.*.::*        : .*.. ***   * :*::**...  *. :*:

AT4G27950.1     RGVRQRPWGKWAAEIRDPEQRRRIWLGTFATAEEAAIVYDNAAIKLRGPDALTNF-TVQP
gm040028_Glyma1 RGVRQRPWGKWAAEIRDPVQRVRIWLGTFKTAEEAALCYDNAAITLRGPDALTNFGRSRP
                ****************** ** ******* ******: ******.**********   :*

AT4G27950.1     EPEPVQEQEQE------PESNMSVSISESMDDSQ----HLSSPTSVLNY--QTYVSEEPI
gm040028_Glyma1 EETPEKEEMPEMKVVVKPETQVSVSVSGCYDSGDECCLNLSSPTSVLQFSAEPYKPDEPF
                *  * :*:  *      **:::***:* . *..:    :********::  :.* .:**:

AT4G27950.1     DSLIKPVKQEFLEPE--QEPISWHLGEGNTNTNDDSFPLDITFLDNYFNESLPDISIFDQ
gm040028_Glyma1 PDM--PWDDVFNFPVMFDEPLS-HL-------FDETTPFSISDVDDYFQ----DILLGSD
                 .:  * .: *  *   :**:* **        *:: *:.*: :*:**:    ** : .:

AT4G27950.1     PMSPIQPTENDFFNDLMLF---------------DSNAEEYYSSEIKEIGSSFNDLDDSL
gm040028_Glyma1 P--------------LVLFCFGLILVALVLAFLGD------YSSFLARTTQCVN--NKSS
                *              *:**               *      *** : .  ...*  :.* 

AT4G27950.1     ISDLLLV-------
gm040028_Glyma1 VCEMKCRRLFPCRR
                :.::
BoxShade v3.31 C (beta, 970507) Output
AT4G27950.1     M M M D E F M D L R P V K Y T E H K T V I R K Y T K K S S M E R K T S V R D S A R L V R V S M T D R D A T D S S S D E E
gm040028_Glyma1    - - M E Q Q N S I L - C K Y T E H Q T V M K K H - - - - - M K S K D N T F C S P K V I S I S L I D P Y A T D S S S D E E
 
AT4G27950.1     E F L F P R R R V K R L I N E I R V E P S S S S T G D V S A S P T K D R K R I N V D - S T V Q K P S V S G Q N Q - K K Y
gm040028_Glyma1    N V M - R R R R V K R Y V N R I E L Q P - - - - - - - - A F K P V T T R K R H A G D A A T L R K P P A K V T N S C R K F
 
AT4G27950.1     R G V R Q R P W G K W A A E I R D P E Q R R R I W L G T F A T A E E A A I V Y D N A A I K L R G P D A L T N F - T V Q P
gm040028_Glyma1    R G V R Q R P W G K W A A E I R D P V Q R V R I W L G T F K T A E E A A L C Y D N A A I T L R G P D A L T N F G R S R P
 
AT4G27950.1     E P E P V Q E Q E Q E - - - - - - P E S N M S V S I S E S M D D S Q - - - - H L S S P T S V L N Y - - Q T Y V S E E P I
gm040028_Glyma1    E E T P E K E E M P E M K V V V K P E T Q V S V S V S G C Y D S G D E C C L N L S S P T S V L Q F S A E P Y K P D E P F
 
AT4G27950.1     D S L I K P V K Q E F L E P E - - Q E P I S W H L G E G N T N T N D D S F P L D I T F L D N Y F N E S L P D I S I F D Q
gm040028_Glyma1    P D M - - P W D D V F N F P V M F D E P L S - H L - - - - - - - F D E T T P F S I S D V D D Y F Q - - - - D I L L G S D
 
AT4G27950.1     P M S P I Q P T E N D F F N D L M L F - - - - - - - - - - - - - - - D S N A E E Y Y S S E I K E I G S S F N D L D D S L
gm040028_Glyma1    P - - - - - - - - - - - - - - L V L F C F G L I L V A L V L A F L G D - - - - - - Y S S F L A R T T Q C V N - - N K S S
 
AT4G27950.1     I S D L L L V - - - - - - -
gm040028_Glyma1    V C E M K C R R L F P C R R
 
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