fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G28110.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp002778 not found in 471aa AT5G15310.1 1st_not 0.407207207 II
Pp011683 not found in 477aa AT3G01140.1 not_not 0.403603603 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G28110.1     MGRSPCCDKNGVKKGPWTAEEDQKLIDYIRFHGPGNWRTLPKNAGLHRCGKSCRLRWTNY
pp002778_Pp1s31 MGRTPCCDKMGLKKGPWTPDEDQKLVTYIQRNGHGSWRALPKHAGLLRCGKSCRLRWTNY
pp011683_Pp1s10 MVRAPCCDKMGLKKGPWTPEEDQKLVDYIQRFGHGSWRALPKHAGLSRCGKSCRLRWTNY
                * *:***** *:******.:*****: **:  * *.**:***:*** *************

AT4G28110.1     LRPDIKRGRFSFEEEETIIQLHSVMGNKWSAIAARLPGRTDNEIKNHWNTHIRKRLVRSG
pp002778_Pp1s31 LRPDIKRGRFSFEEEQVIIHLHGILGNRWSAIAAHLPGRTDNEIKNYWNTHLRKRLLQMG
pp011683_Pp1s10 LRPDIKRGQFSFEEEQVIIHLHGLLGNRWSAIAAYLPGRTDNEIKNHWNTHLKKRLLQMG
                ********:******:.**:**.::**:****** ***********:****::***:: *

AT4G28110.1     IDPVTHSPRLDLL----DLSSLLSALFNQPN-------------------FSAVATH---
pp002778_Pp1s31 IDPVTHKVRSNLLIENLDLKPMVSSTLSHMSQWDRVRMEMEARLSSDY--FAKSSAHGAA
pp011683_Pp1s10 IDPVTHKEKSNLLLDNMELKPIVCSTLTHMSQWDRVRMETEARLANNYTKLASQATQGYS
                ******. : :**    :*..::.: :.: .                   ::  :::   

AT4G28110.1     ---------------------------ASSLLNPD----VLRLASLLLPLQ---------
pp002778_Pp1s31 IFEASGTSASFIKAPSDCSMRSWKTQVSESLLRRDFGV-LEKLPPCSMDLQTVLQDWEDS
pp011683_Pp1s10 CCASPGLSG-------DASVRHWKTQISESLLRREFGRGLERSASASIELPAILQDWEEE
                                           :.***. :    : : ..  : *          

AT4G28110.1     --NPNPVYPSNLDQNL--QTPNTS-SESSQP--------------QAETSTVPTNYET-S
pp002778_Pp1s31 -LHCQPMEPGLYDSQMRAKTHSGSHSGYSQTPRNDNCSGTTVTDLAARFETFPSFHQTSP
pp011683_Pp1s10 LLHGQALDASLYNSPI-SETPSSSLSDCSQT-RFD-----TQADSTSRFQTFPNFQET-P
                  : :.: ..  :. :  :* . * *  **.               :. .*.*.  :* .

AT4G28110.1     SLEPMNA--RLDDV---------GLAD-VLPPLS--------ESFDLDSLMSTPMS----
pp002778_Pp1s31 SPSPLPQTSQISDSFTSSGTK--LFPD-LPKPNSLPSMIP--EHFSPTSTLSSPFGTSPS
pp011683_Pp1s10 SPAALPQ--QAADVVCAAPTNCGLFTNPYTEPKTQSSIISTEQLMSPTSTLSSPFGTTPL
                *  .:    :  *           :.:    * :        : :.  * :*:*:.    

AT4G28110.1     ---------------SPRQNSIEAETNSSTFFD---------------------------
pp002778_Pp1s31 DFMVPPPSSNCEIAFS---TSPPLQLPSPTFWT-SLSAPTT----------------MGA
pp011683_Pp1s10 DFLLPSSSASCDLAFSPSRASETVQLPSPTFWTVPASLPTSSSQASDPAGRAEAAPHSAE
                               *    *   :  *.**:                            

AT4G28110.1     --FGIPEDF---ILD-----------------------------------DF---MF---
pp002778_Pp1s31 GDLQLPSEIPELLMELHAEPAVPDLIVATVPTTTAGTPGWTSQQGLIESKDYWANMLHLV
pp011683_Pp1s10 GLMQIPSEI---LMELQEPSLIPPPKAVAAPATRA-SPGW-SGYGVLESKDYWTNMLHLV
                  : :*.::   :::                                   *:   *:   

AT4G28110.1     --------------------
pp002778_Pp1s31 GPPASQQLSTLLSTPARLTR
pp011683_Pp1s10 GSTSHQPYLSFCA-PAGLTR
BoxShade v3.31 C (beta, 970507) Output
AT4G28110.1     M G R S P C C D K N G V K K G P W T A E E D Q K L I D Y I R F H G P G N W R T L P K N A G L H R C G K S C R L R W T N Y
pp002778_Pp1s31    M G R T P C C D K M G L K K G P W T P D E D Q K L V T Y I Q R N G H G S W R A L P K H A G L L R C G K S C R L R W T N Y
pp011683_Pp1s10    M V R A P C C D K M G L K K G P W T P E E D Q K L V D Y I Q R F G H G S W R A L P K H A G L S R C G K S C R L R W T N Y
 
AT4G28110.1     L R P D I K R G R F S F E E E E T I I Q L H S V M G N K W S A I A A R L P G R T D N E I K N H W N T H I R K R L V R S G
pp002778_Pp1s31    L R P D I K R G R F S F E E E Q V I I H L H G I L G N R W S A I A A H L P G R T D N E I K N Y W N T H L R K R L L Q M G
pp011683_Pp1s10    L R P D I K R G Q F S F E E E Q V I I H L H G L L G N R W S A I A A Y L P G R T D N E I K N H W N T H L K K R L L Q M G
 
AT4G28110.1     I D P V T H S P R L D L L - - - - D L S S L L S A L F N Q P N - - - - - - - - - - - - - - - - - - - F S A V A T H - - -
pp002778_Pp1s31    I D P V T H K V R S N L L I E N L D L K P M V S S T L S H M S Q W D R V R M E M E A R L S S D Y - - F A K S S A H G A A
pp011683_Pp1s10    I D P V T H K E K S N L L L D N M E L K P I V C S T L T H M S Q W D R V R M E T E A R L A N N Y T K L A S Q A T Q G Y S
 
AT4G28110.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - A S S L L N P D - - - - V L R L A S L L L P L Q - - - - - - - - -
pp002778_Pp1s31    I F E A S G T S A S F I K A P S D C S M R S W K T Q V S E S L L R R D F G V - L E K L P P C S M D L Q T V L Q D W E D S
pp011683_Pp1s10    C C A S P G L S G - - - - - - - D A S V R H W K T Q I S E S L L R R E F G R G L E R S A S A S I E L P A I L Q D W E E E
 
AT4G28110.1     - - N P N P V Y P S N L D Q N L - - Q T P N T S - S E S S Q P - - - - - - - - - - - - - - Q A E T S T V P T N Y E T - S
pp002778_Pp1s31    - L H C Q P M E P G L Y D S Q M R A K T H S G S H S G Y S Q T P R N D N C S G T T V T D L A A R F E T F P S F H Q T S P
pp011683_Pp1s10    L L H G Q A L D A S L Y N S P I - S E T P S S S L S D C S Q T - R F D - - - - - T Q A D S T S R F Q T F P N F Q E T - P
 
AT4G28110.1     S L E P M N A - - R L D D V - - - - - - - - - G L A D - V L P P L S - - - - - - - - E S F D L D S L M S T P M S - - - -
pp002778_Pp1s31    S P S P L P Q T S Q I S D S F T S S G T K - - L F P D - L P K P N S L P S M I P - - E H F S P T S T L S S P F G T S P S
pp011683_Pp1s10    S P A A L P Q - - Q A A D V V C A A P T N C G L F T N P Y T E P K T Q S S I I S T E Q L M S P T S T L S S P F G T T P L
 
AT4G28110.1     - - - - - - - - - - - - - - - S P R Q N S I E A E T N S S T F F D - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp002778_Pp1s31    D F M V P P P S S N C E I A F S - - - T S P P L Q L P S P T F W T - S L S A P T T - - - - - - - - - - - - - - - - M G A
pp011683_Pp1s10    D F L L P S S S A S C D L A F S P S R A S E T V Q L P S P T F W T V P A S L P T S S S Q A S D P A G R A E A A P H S A E
 
AT4G28110.1     - - F G I P E D F - - - I L D - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - D F - - - M F - - -
pp002778_Pp1s31    G D L Q L P S E I P E L L M E L H A E P A V P D L I V A T V P T T T A G T P G W T S Q Q G L I E S K D Y W A N M L H L V
pp011683_Pp1s10    G L M Q I P S E I - - - L M E L Q E P S L I P P P K A V A A P A T R A - S P G W - S G Y G V L E S K D Y W T N M L H L V
 
AT4G28110.1     - - - - - - - - - - - - - - - - - - - -
pp002778_Pp1s31    G P P A S Q Q L S T L L S T P A R L T R
pp011683_Pp1s10    G S T S H Q P Y L S F C A - P A G L T R
 
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