fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G28110.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt013723 not found in 364aa AT4G21440.1 1st_not 0.504504504 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G28110.1     MGRSPCCDKNGVKKGPWTAEEDQKLIDYIRFHGPGNWRTLPKNAGLHRCGKSCRLRWTNY
pt013723_POPTR_ MGRVPCCDKNGLKKGPWTPEEDHKLISFIQLHGPGNWRSLPKNAGLQRCGKSCRLRWTNY
                *** *******:******.***:***.:*::*******:*******:*************

AT4G28110.1     LRPDIKRGRFSFEEEETIIQLHSVMGNKWSAIAARLPGRTDNEIKNHWNTHIRKRLVRSG
pt013723_POPTR_ LRPDIKRGRFSFEEEETIIQLHSVLGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRNG
                ************************:*********************:*********:*.*

AT4G28110.1     IDPVTHSPRLDLLDLSSLLSALFNQP----NFSAVATHASSLLNPDVLRLASLLLPLQNP
pt013723_POPTR_ IDPVTHAPRLDLLDLSSIISSALCNPSTLLNLSTLVGNTQALLNPNILRLATTLSSLKQE
                ******:**********::*: : :*    *:*::. ::.:****::****: * .*:: 

AT4G28110.1     NP-VYPSNLDQN------LQTPNTSSESSQPQ--------------AETST---------
pt013723_POPTR_ NSDMFLQKLQENQLFNPLLQNQDVPSLFSQPRQFHNLAQQVPACTTATTSTGGFIDQTTQ
                *. :: .:*::*      **. :..*  ***:              * ***         

AT4G28110.1     ---------------------VPTNYETSSLEPMNARLDDVGLADVL-------PPLSE-
pt013723_POPTR_ VMQANVEGFSSNPTSTFNCQNSPENFVPSSL---NESL--VSLPNFYCNGTTTDPTVPEP
                                      * *: .***   *  *  *.*.:.        *.:.* 

AT4G28110.1     --------------SFDLDSLMSTPMSSPRQ-NSIEAETNSSTFFD----------FGIP
pt013723_POPTR_ GEHSGFQSANNGYQNFSIDSVISTPLMSPDPLNSSSTYLNSSSTEDERECYSSLLKFEIP
                              .*.:**::***: **   ** .:  ***:  *          * **

AT4G28110.1     EDFILDDFMF
pt013723_POPTR_ ESLNIDDFL-
                *.: :***:
BoxShade v3.31 C (beta, 970507) Output
AT4G28110.1     M G R S P C C D K N G V K K G P W T A E E D Q K L I D Y I R F H G P G N W R T L P K N A G L H R C G K S C R L R W T N Y
pt013723_POPTR_    M G R V P C C D K N G L K K G P W T P E E D H K L I S F I Q L H G P G N W R S L P K N A G L Q R C G K S C R L R W T N Y
 
AT4G28110.1     L R P D I K R G R F S F E E E E T I I Q L H S V M G N K W S A I A A R L P G R T D N E I K N H W N T H I R K R L V R S G
pt013723_POPTR_    L R P D I K R G R F S F E E E E T I I Q L H S V L G N K W S A I A A R L P G R T D N E I K N Y W N T H I R K R L L R N G
 
AT4G28110.1     I D P V T H S P R L D L L D L S S L L S A L F N Q P - - - - N F S A V A T H A S S L L N P D V L R L A S L L L P L Q N P
pt013723_POPTR_    I D P V T H A P R L D L L D L S S I I S S A L C N P S T L L N L S T L V G N T Q A L L N P N I L R L A T T L S S L K Q E
 
AT4G28110.1     N P - V Y P S N L D Q N - - - - - - L Q T P N T S S E S S Q P Q - - - - - - - - - - - - - - A E T S T - - - - - - - - -
pt013723_POPTR_    N S D M F L Q K L Q E N Q L F N P L L Q N Q D V P S L F S Q P R Q F H N L A Q Q V P A C T T A T T S T G G F I D Q T T Q
 
AT4G28110.1     - - - - - - - - - - - - - - - - - - - - - V P T N Y E T S S L E P M N A R L D D V G L A D V L - - - - - - - P P L S E -
pt013723_POPTR_    V M Q A N V E G F S S N P T S T F N C Q N S P E N F V P S S L - - - N E S L - - V S L P N F Y C N G T T T D P T V P E P
 
AT4G28110.1     - - - - - - - - - - - - - - S F D L D S L M S T P M S S P R Q - N S I E A E T N S S T F F D - - - - - - - - - - F G I P
pt013723_POPTR_    G E H S G F Q S A N N G Y Q N F S I D S V I S T P L M S P D P L N S S S T Y L N S S S T E D E R E C Y S S L L K F E I P
 
AT4G28110.1     E D F I L D D F M F
pt013723_POPTR_    E S L N I D D F L -
 
0