fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G28110.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb023923 not found in 508aa AT4G05100.1 1st_not 0.457657657 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G28110.1     MGRSPCCDKNGVKKGPWTAEEDQKLIDYIRFHGPGNWRTLPKNAGLHRCGKSCRLRWTNY
Sb023923_Sorbi1 MGRAPCCEKSGMKKGPWTPEEDEKLIAYIKKHGQGNWRTLPKNAGLARCGKSCRLRWTNY
                ***:***:*.*:******.***:*** **: ** ************ *************

AT4G28110.1     LRPDIKRGRFSFEEEETIIQLHSVMGNKWSAIAARLPGRTDNEIKNHWNTHIRKRLVRSG
Sb023923_Sorbi1 LRPDIKRGRFSFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRMG
                ***********************::*********************:*********:* *

AT4G28110.1     IDPVTHSPRLDLLDLSSLLSALFNQPNFSAVATHASS-----------LLN-PDVLRLAS
Sb023923_Sorbi1 IDPVTHAPRLDLLDLSALL-----KP--AAAAYYPTQADLDTLRALEPLANYPDLLRLAS
                ******:*********:**     :*  :*.* :.:.           * * **:*****

AT4G28110.1     LLL----------------------------------------PLQN-------------
Sb023923_Sorbi1 TLLSSGPPAIGDHHQNGQLLPWILQAQMAQQAAAAMAQQVAPPPQQQAEQFMQAGAACQM
                 **                                        * *:             

AT4G28110.1     PNPVY----PSNLDQNL---------------QTPNTS------------------SESS
Sb023923_Sorbi1 PDLVHMNSNPTTVQQQLAAAHQDMAAAACHSMQPPNNTGYEVDSLDVPALMQMVQAADAS
                *: *:    *:.::*:*               *.**.:                  :::*

AT4G28110.1     QPQAETSTVPTNYETSSLEPMNARLDDVGLADVLPPLSESFDLDSLMSTPMSSP--RQNS
Sb023923_Sorbi1 NLQQWSSTV-----TSSSNNNNNNNNNVG---------------SGVSTPSSSPVARLNH
                : *  :***     *** :  * . ::**               * :*** ***  * * 

AT4G28110.1     IEAETNSS----------------TFFDFGIPEDFILDDFMF
Sb023923_Sorbi1 STSTTTTTYGGASASTSNDAAAAAALFNMQLSELLDVSDYM-
                  : *.::                ::*:: :.* : :.*:*
BoxShade v3.31 C (beta, 970507) Output
AT4G28110.1     M G R S P C C D K N G V K K G P W T A E E D Q K L I D Y I R F H G P G N W R T L P K N A G L H R C G K S C R L R W T N Y
Sb023923_Sorbi1    M G R A P C C E K S G M K K G P W T P E E D E K L I A Y I K K H G Q G N W R T L P K N A G L A R C G K S C R L R W T N Y
 
AT4G28110.1     L R P D I K R G R F S F E E E E T I I Q L H S V M G N K W S A I A A R L P G R T D N E I K N H W N T H I R K R L V R S G
Sb023923_Sorbi1    L R P D I K R G R F S F E E E E T I I Q L H S I L G N K W S A I A A R L P G R T D N E I K N Y W N T H I R K R L L R M G
 
AT4G28110.1     I D P V T H S P R L D L L D L S S L L S A L F N Q P N F S A V A T H A S S - - - - - - - - - - - L L N - P D V L R L A S
Sb023923_Sorbi1    I D P V T H A P R L D L L D L S A L L - - - - - K P - - A A A A Y Y P T Q A D L D T L R A L E P L A N Y P D L L R L A S
 
AT4G28110.1     L L L - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - P L Q N - - - - - - - - - - - - -
Sb023923_Sorbi1    T L L S S G P P A I G D H H Q N G Q L L P W I L Q A Q M A Q Q A A A A M A Q Q V A P P P Q Q Q A E Q F M Q A G A A C Q M
 
AT4G28110.1     P N P V Y - - - - P S N L D Q N L - - - - - - - - - - - - - - - Q T P N T S - - - - - - - - - - - - - - - - - - S E S S
Sb023923_Sorbi1    P D L V H M N S N P T T V Q Q Q L A A A H Q D M A A A A C H S M Q P P N N T G Y E V D S L D V P A L M Q M V Q A A D A S
 
AT4G28110.1     Q P Q A E T S T V P T N Y E T S S L E P M N A R L D D V G L A D V L P P L S E S F D L D S L M S T P M S S P - - R Q N S
Sb023923_Sorbi1    N L Q Q W S S T V - - - - - T S S S N N N N N N N N N V G - - - - - - - - - - - - - - - S G V S T P S S S P V A R L N H
 
AT4G28110.1     I E A E T N S S - - - - - - - - - - - - - - - - T F F D F G I P E D F I L D D F M F
Sb023923_Sorbi1    S T S T T T T T Y G G A S A S T S N D A A A A A A L F N M Q L S E L L D V S D Y M -
 
1