fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G28110.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm041391 not found in 335aa AT4G21440.1 1st_not 0.488288288 II
Gm037693 not found in 310aa AT4G28110.1 not_1st 0.486486486 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G28110.1     MGRSPCCDKNGVKKGPWTAEEDQKLIDYIRFHGPGNWRTLPKNAGLHRCGKSCRLRWTNY
gm041391_Glyma1 MGRAPCCDKNGLKKGPWTTEEDQKLIDYIQKNGYGNWRTLPKNAGLQRCGKSCRLRWTNY
gm037693_Glyma1 MGRAPCCDKNGLKKGPWTSEEDLLLTNYIQTHGPGNWRTIPKNAGLQRCGKSCRLRWTNY
                ***:*******:******:***  * :**: :* *****:******:*************

AT4G28110.1     LRPDIKRGRFSFEEEETIIQLHSVMGNKWSAIAARLPGRTDNEIKNHWNTHIRKRLVRSG
gm041391_Glyma1 LRPDIKRGRFSFEEEETIIQLHSILGNKWSAIASRLPGRTDNEIKNYWNTHIRKRLLRMG
gm037693_Glyma1 LRPDIKRGRFSFEEEEAIIQLHSVLGNKWSAIAARLPGRTDNEIKNYWNTHVRKRLLRTG
                ****************:******::********:************:****:****:* *

AT4G28110.1     IDPVTHSPRLDLLDLSSLLSALF------NQPNFSAVATHASSLLNPDVLRLASLLLPL-
gm041391_Glyma1 IDPVTHSPRLDLLDINSILNASFYG---SSQINIQRLLGMHQYMVNPELLKLASSLFSTS
gm037693_Glyma1 IDPVTHAPRLDLLDISSILRSAI-GNVNPSILNLQGLLG-AQALMNPEFLKLAATATLLS
                ******:*******:.*:* : :      .  *:. :    . ::**:.*:**:      

AT4G28110.1     ----QNPN--PVYPSN---------LDQNLQTPN----TSS------ESSQPQAETSTVP
gm041391_Glyma1 QQQHNDPDDMPAQKGQ---------LQNQLCDPQ----IQNHVPHFVQFQDPVQEVPACS
gm037693_Glyma1 LKNNENPSNLVSQVQQQFNSAGNCLVQNQVAAPNDPFQTPTHVNNGLSSSSPE---NSIL
                    ::*.       :         :::::  *:      .      . ..*     :  

AT4G28110.1     TNYETSSLEPMNARLDDV-------------GLADVLPPLSE-----------SFDLDSL
gm041391_Glyma1 TIYQQLSDWQLSSLTDDYVPQLSSYNYYSSDGQNLMYDPLSEPSNFHSNNSNQNFRFASV
gm037693_Glyma1 SHLGENNNYQLNAQQINQV--------------DLLLDHELE---HYLNCVNQNIGYESV
                :     .   :.:   :                  :     *           .:   *:

AT4G28110.1     MSTPMSSP---RQNSI-----------EAETNSSTFFDFGIPEDFILDDFMF
gm041391_Glyma1 LSTPSSSPTPLNSNSTIINGSNTEDERDQSYDSSNMLKFEIPDILDVNEFM-
gm037693_Glyma1 --TPLSTPTPLNSSSTYVNSSTEE---ERDTYCSDIF---------------
                  ** *:*   ...*            : .  .* ::
BoxShade v3.31 C (beta, 970507) Output
AT4G28110.1     M G R S P C C D K N G V K K G P W T A E E D Q K L I D Y I R F H G P G N W R T L P K N A G L H R C G K S C R L R W T N Y
gm041391_Glyma1    M G R A P C C D K N G L K K G P W T T E E D Q K L I D Y I Q K N G Y G N W R T L P K N A G L Q R C G K S C R L R W T N Y
gm037693_Glyma1    M G R A P C C D K N G L K K G P W T S E E D L L L T N Y I Q T H G P G N W R T I P K N A G L Q R C G K S C R L R W T N Y
 
AT4G28110.1     L R P D I K R G R F S F E E E E T I I Q L H S V M G N K W S A I A A R L P G R T D N E I K N H W N T H I R K R L V R S G
gm041391_Glyma1    L R P D I K R G R F S F E E E E T I I Q L H S I L G N K W S A I A S R L P G R T D N E I K N Y W N T H I R K R L L R M G
gm037693_Glyma1    L R P D I K R G R F S F E E E E A I I Q L H S V L G N K W S A I A A R L P G R T D N E I K N Y W N T H V R K R L L R T G
 
AT4G28110.1     I D P V T H S P R L D L L D L S S L L S A L F - - - - - - N Q P N F S A V A T H A S S L L N P D V L R L A S L L L P L -
gm041391_Glyma1    I D P V T H S P R L D L L D I N S I L N A S F Y G - - - S S Q I N I Q R L L G M H Q Y M V N P E L L K L A S S L F S T S
gm037693_Glyma1    I D P V T H A P R L D L L D I S S I L R S A I - G N V N P S I L N L Q G L L G - A Q A L M N P E F L K L A A T A T L L S
 
AT4G28110.1     - - - - Q N P N - - P V Y P S N - - - - - - - - - L D Q N L Q T P N - - - - T S S - - - - - - E S S Q P Q A E T S T V P
gm041391_Glyma1    Q Q Q H N D P D D M P A Q K G Q - - - - - - - - - L Q N Q L C D P Q - - - - I Q N H V P H F V Q F Q D P V Q E V P A C S
gm037693_Glyma1    L K N N E N P S N L V S Q V Q Q Q F N S A G N C L V Q N Q V A A P N D P F Q T P T H V N N G L S S S S P E - - - N S I L
 
AT4G28110.1     T N Y E T S S L E P M N A R L D D V - - - - - - - - - - - - - G L A D V L P P L S E - - - - - - - - - - - S F D L D S L
gm041391_Glyma1    T I Y Q Q L S D W Q L S S L T D D Y V P Q L S S Y N Y Y S S D G Q N L M Y D P L S E P S N F H S N N S N Q N F R F A S V
gm037693_Glyma1    S H L G E N N N Y Q L N A Q Q I N Q V - - - - - - - - - - - - - - D L L L D H E L E - - - H Y L N C V N Q N I G Y E S V
 
AT4G28110.1     M S T P M S S P - - - R Q N S I - - - - - - - - - - - E A E T N S S T F F D F G I P E D F I L D D F M F
gm041391_Glyma1    L S T P S S S P T P L N S N S T I I N G S N T E D E R D Q S Y D S S N M L K F E I P D I L D V N E F M -
gm037693_Glyma1    - - T P L S T P T P L N S S S T Y V N S S T E E - - - E R D T Y C S D I F - - - - - - - - - - - - - - -
 
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