fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G28190.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os004142 not found in 235aa AT4G28190.1 1st_1st 0.664728682 Ia
Os022302 not found in 233aa AT4G28190.1 not_1st 0.598837209 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G28190.1     --MANNEGEMQCGSMLFKQEELQEMSGVNVGGDYVEVMCGCTSHRYGDAVARLRVFPTGD
Os004142_Os01t0 MAAAANGG----GAALFSEEELRDVSGVRRCEDFVEVTCGCTSHRYGDAVGRLRVYASGD
Os022302_Os05t0 -MAVEN------GAALFGEEELRDVSGVRVGDRFVEVTCGCTSARYGDAVGRLRLFASGE
                   . *      *: ** :***:::***.    :*** ***** ******.***::.:*:

AT4G28190.1     LEITCECTPGCDEDKLTPAAFEKHSGRETARKWKNNVWVIIGGEKVPLSKTVLLKYYNES
Os004142_Os01t0 LEVSCECTPGCREDKLTPSAFEKHSGRETAGKWRNTVWVMVQGEKVPLSKTALLKYYSLS
Os022302_Os05t0 LQVSCDCTPGCDQDKLSPAAFEKHSGRETAGRWQNTVWVMVKGDKVALSKTCLLRYY---
                *:::*:***** :***:*:*********** :*:*.***:: *:**.**** **:**   

AT4G28190.1     SKKCSRSNRSQGAKV--CHRDEFVGCNDCGKERRFRLRSRDECRLHHNAMGDPNWKCSDF
Os004142_Os01t0 HKSANGSNKGRNGRL--SHRDEFIHCTECGKERRFRLRSKEECRIYHDALAKPNWTCADL
Os022302_Os05t0 HKKLKSSSANGGGRRPPCHRDEFVRCAGCGKERRFRLRTKEECRLYHDAMARHDWTCKDM
                 *. . *. . ..:   .*****: *  **********:::***::*:*:.  :*.* *:

AT4G28190.1     PYDKITCEEEEERGSRKVYRGCTRSPSCKGCTSCVCFGCELCRFSECTCQTCVDFTS---
Os004142_Os01t0 TTDRVTCGDEEERASRKVLRGCSRSTSCTGCVKCVCFGCEICRFTDCGCQTCVDFYH---
Os022302_Os05t0 PPAG-SCEEEEERASRKASRGCTRAATCKGCVRCVCFGCETCRFAGCACQTCVDFYRINC
                .    :* :****.***. ***:*:.:*.**. ******* ***: * *******     

AT4G28190.1     --NVKA
Os004142_Os01t0 --NSKE
Os022302_Os05t0 MINS--
                  *
BoxShade v3.31 C (beta, 970507) Output
AT4G28190.1     - - M A N N E G E M Q C G S M L F K Q E E L Q E M S G V N V G G D Y V E V M C G C T S H R Y G D A V A R L R V F P T G D
Os004142_Os01t0    M A A A A N G G - - - - G A A L F S E E E L R D V S G V R R C E D F V E V T C G C T S H R Y G D A V G R L R V Y A S G D
Os022302_Os05t0    - M A V E N - - - - - - G A A L F G E E E L R D V S G V R V G D R F V E V T C G C T S A R Y G D A V G R L R L F A S G E
 
AT4G28190.1     L E I T C E C T P G C D E D K L T P A A F E K H S G R E T A R K W K N N V W V I I G G E K V P L S K T V L L K Y Y N E S
Os004142_Os01t0    L E V S C E C T P G C R E D K L T P S A F E K H S G R E T A G K W R N T V W V M V Q G E K V P L S K T A L L K Y Y S L S
Os022302_Os05t0    L Q V S C D C T P G C D Q D K L S P A A F E K H S G R E T A G R W Q N T V W V M V K G D K V A L S K T C L L R Y Y - - -
 
AT4G28190.1     S K K C S R S N R S Q G A K V - - C H R D E F V G C N D C G K E R R F R L R S R D E C R L H H N A M G D P N W K C S D F
Os004142_Os01t0    H K S A N G S N K G R N G R L - - S H R D E F I H C T E C G K E R R F R L R S K E E C R I Y H D A L A K P N W T C A D L
Os022302_Os05t0    H K K L K S S S A N G G G R R P P C H R D E F V R C A G C G K E R R F R L R T K E E C R L Y H D A M A R H D W T C K D M
 
AT4G28190.1     P Y D K I T C E E E E E R G S R K V Y R G C T R S P S C K G C T S C V C F G C E L C R F S E C T C Q T C V D F T S - - -
Os004142_Os01t0    T T D R V T C G D E E E R A S R K V L R G C S R S T S C T G C V K C V C F G C E I C R F T D C G C Q T C V D F Y H - - -
Os022302_Os05t0    P P A G - S C E E E E E R A S R K A S R G C T R A A T C K G C V R C V C F G C E T C R F A G C A C Q T C V D F Y R I N C
 
AT4G28190.1     - - N V K A
Os004142_Os01t0    - - N S K E
Os022302_Os05t0    M I N S - -
 
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