fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G28190.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm033370 not found in 236aa AT4G28190.1 1st_1st 0.759689922 Ia
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G28190.1     MANNEGEMQCGSMLFKQEELQEMSGVNVGGDYVEVMCGCTSHRYGDAVARLRVFPTGDLE
gm033370_Glyma1 MANGL-ERESGLTLFSEEELREVSGVKRVGDYVEVTCGCTSHRYGDAVGRLRVFVNGYLE
                ***.  * :.*  **.:***:*:***:  ****** ************.***** .* **

AT4G28190.1     ITCECTPGCDEDKLTPAAFEKHSGRETARKWKNNVWVIIGGEKVPLSKTVLLKYYNESSK
gm033370_Glyma1 ITCECTPGCQEDKLTPSAFEKHSGRETARKWKNNVWVIVNGEKVPLCKTVLLKYYNQVSK
                *********:******:*********************:.******.*********: **

AT4G28190.1     KCSRSNRSQGAKVCHRDEFVGCNDCGKERRFRLRSRDECRLHHNAMGDPNWKCSDFPYDK
gm033370_Glyma1 AANGSHRSHNGRACHRDEFVRCTSCNKERRFRLRTKEECRIHHDALADANWKCSDLPYDK
                 .. *:**:..:.******* *..*.********:::***:**:*:.*.******:****

AT4G28190.1     ITCEEEEERGSRKVYRGCTRSPSCKGCTSCVCFGCELCRFSECTCQTCVDFTSNVKA
gm033370_Glyma1 ITCDDEEERASRRVYRGCTRSPTCKGCTSCVCFGCDICRFSDCSCQTCADFTNNAKA
                ***::****.**:*********:************::****:*:****.***.*.**
BoxShade v3.31 C (beta, 970507) Output
AT4G28190.1     M A N N E G E M Q C G S M L F K Q E E L Q E M S G V N V G G D Y V E V M C G C T S H R Y G D A V A R L R V F P T G D L E
gm033370_Glyma1    M A N G L - E R E S G L T L F S E E E L R E V S G V K R V G D Y V E V T C G C T S H R Y G D A V G R L R V F V N G Y L E
 
AT4G28190.1     I T C E C T P G C D E D K L T P A A F E K H S G R E T A R K W K N N V W V I I G G E K V P L S K T V L L K Y Y N E S S K
gm033370_Glyma1    I T C E C T P G C Q E D K L T P S A F E K H S G R E T A R K W K N N V W V I V N G E K V P L C K T V L L K Y Y N Q V S K
 
AT4G28190.1     K C S R S N R S Q G A K V C H R D E F V G C N D C G K E R R F R L R S R D E C R L H H N A M G D P N W K C S D F P Y D K
gm033370_Glyma1    A A N G S H R S H N G R A C H R D E F V R C T S C N K E R R F R L R T K E E C R I H H D A L A D A N W K C S D L P Y D K
 
AT4G28190.1     I T C E E E E E R G S R K V Y R G C T R S P S C K G C T S C V C F G C E L C R F S E C T C Q T C V D F T S N V K A
gm033370_Glyma1    I T C D D E E E R A S R R V Y R G C T R S P T C K G C T S C V C F G C D I C R F S D C S C Q T C A D F T N N A K A
 
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