fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G28500.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb019101 not found in 323aa AT4G28500.1 not_1st 0.631672597 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G28500.1     MTWCNDRSDVQTVERIIPSPGAA---ESPVASLPVSCHKTCPSCGHNFKF-HEQAGIHDL
Sb019101_Sorbi1 MTWCNGFNDVRAAVESSLSPAAAAVGKKAAASLAVLV-KMCPSCGHRAQYEQESTTIQDL
                *****. .**::. .   **.**   :...***.*   * ******. :: :*.: *:**

AT4G28500.1     PGLPAGVKFDPTDQEVLEHLEGKVRDDAKKLHPLIDEFIRTIDGENGICYTHPEKLPGVN
Sb019101_Sorbi1 PGLPAGVKFDPTDQELLEHLEGKARPDTRKLHPLVDEFIPTIDGENGICYTHPENLPGVS
                ***************:*******.* *::*****:**** **************:****.

AT4G28500.1     KDGTVRHFFHRPSKAYTTGTRKRRKVHT--DSDVGGETRWHKTGKTRPVLAGGRVRGYKK
Sb019101_Sorbi1 KDGLVRHFFHRPSRAYTTGTRKRRKVHSGDGDDGGGETRWHKTGKTRPVLSNGRPRGYKK
                *** *********:*************:  ..* ****************:.** *****

AT4G28500.1     ILVLYTNYGKQKKPEKTNWVMHQYHLGTSEEEKEGELVVSKVFYQTQPRQCG--------
Sb019101_Sorbi1 ILVLYTNYGKQRKPEKTNWVMHQYHLGSDEEERDGELVVSKVFFQTQPRQCGSAMARQEA
                ***********:***************:.***::*********:********        

AT4G28500.1     GSVAAAATAKDRPYL----HGLGGGGGRHLHYHLHHNNGNGKSNGSGGTAGAGEYYHNIP
Sb019101_Sorbi1 GVVPAAAFTGSSDALIAVGHHQGGGGGGGLR---EANGGVDQFYSPGAMMGYGQ---GVP
                * *.*** : .   *    *  *****  *:   . *.* .:  ..*.  * *:   .:*

AT4G28500.1     AIISFNQTG-------------IQNHLVHDSQ-PFIP
Sb019101_Sorbi1 A-------GNRAPPAPAAAPHFMPNFAVHAARASFGP
                *       *             : *. ** :: .* *
BoxShade v3.31 C (beta, 970507) Output
AT4G28500.1     M T W C N D R S D V Q T V E R I I P S P G A A - - - E S P V A S L P V S C H K T C P S C G H N F K F - H E Q A G I H D L
Sb019101_Sorbi1    M T W C N G F N D V R A A V E S S L S P A A A A V G K K A A A S L A V L V - K M C P S C G H R A Q Y E Q E S T T I Q D L
 
AT4G28500.1     P G L P A G V K F D P T D Q E V L E H L E G K V R D D A K K L H P L I D E F I R T I D G E N G I C Y T H P E K L P G V N
Sb019101_Sorbi1    P G L P A G V K F D P T D Q E L L E H L E G K A R P D T R K L H P L V D E F I P T I D G E N G I C Y T H P E N L P G V S
 
AT4G28500.1     K D G T V R H F F H R P S K A Y T T G T R K R R K V H T - - D S D V G G E T R W H K T G K T R P V L A G G R V R G Y K K
Sb019101_Sorbi1    K D G L V R H F F H R P S R A Y T T G T R K R R K V H S G D G D D G G G E T R W H K T G K T R P V L S N G R P R G Y K K
 
AT4G28500.1     I L V L Y T N Y G K Q K K P E K T N W V M H Q Y H L G T S E E E K E G E L V V S K V F Y Q T Q P R Q C G - - - - - - - -
Sb019101_Sorbi1    I L V L Y T N Y G K Q R K P E K T N W V M H Q Y H L G S D E E E R D G E L V V S K V F F Q T Q P R Q C G S A M A R Q E A
 
AT4G28500.1     G S V A A A A T A K D R P Y L - - - - H G L G G G G G R H L H Y H L H H N N G N G K S N G S G G T A G A G E Y Y H N I P
Sb019101_Sorbi1    G V V P A A A F T G S S D A L I A V G H H Q G G G G G G G L R - - - E A N G G V D Q F Y S P G A M M G Y G Q - - - G V P
 
AT4G28500.1     A I I S F N Q T G - - - - - - - - - - - - - I Q N H L V H D S Q - P F I P
Sb019101_Sorbi1    A - - - - - - - G N R A P P A P A A A P H F M P N F A V H A A R A S F G P
 
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