fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G28500.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb025585 not found in 394aa AT4G28500.1 1st_1st 0.647686832 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G28500.1     -------------MTWCNDRSDVQTVERIIPSPGAAESPVASLPVSCH----KTCPSCGH
Sb025585_Sorbi1 RGRDRSSSSSSTAMTWCNSFNDVRAVENNLATAAAVAAAKKQQQASSHVNLIRTCPSCGH
                             *****. .**::**. :.:..*. :.  .  .*.*    :*******

AT4G28500.1     NFKFHE---QAGIHDLPGLPAGVKFDPTDQEVLEHLEGKVRDDAKKLHPLIDEFIRTIDG
Sb025585_Sorbi1 RAQYEQVQAAATIQDLPGLPAGVKFDPTDQELLEHLEGKARPDARKLHPLIDEFIPTIEG
                . ::.:    * *:*****************:*******.* **:********** **:*

AT4G28500.1     ENGICYTHPEKLPGVNKDGTVRHFFHRPSKAYTTGTRKRRKVHTDSDVGGETRWHKTGKT
Sb025585_Sorbi1 ENGICYTHPERLPGVGKDGLIRHFFHRPSKAYTTGTRKRRKVHTDEQ-GGETRWHKTGKT
                **********:****.*** :************************.: ************

AT4G28500.1     RPVLAGGRVRGYKKILVLYTNYGKQKKPEKTNWVMHQYHLGTSEEEKEGELVVSKVFYQT
Sb025585_Sorbi1 RPVFTNGKLKGYKKILVLYTNYGKQRKPEKTNWVMHQYHLGSDEEEKDGELVVSKVFYQT
                ***::.*:::***************:***************:.****:************

AT4G28500.1     QPRQCGGSVAAAATAKD-RPYLHGLGGGGGRHLHYHLHHNNGNGKSNGSGGTAGAGEYYH
Sb025585_Sorbi1 QPRQCG---SGSATAKDVVPLAAGLATTDHHHHHHHHHHDDDDG---GNGGSAGIVDFY-
                ******   :.:*****  *   **.  . :* *:* **::.:*   *.**:**  ::* 

AT4G28500.1     NIPAIISFNQT-----------------GIQNHLVHDSQPFIP
Sb025585_Sorbi1 SPAALIGYNQAVAPTNRAAAAASAHLMPNFEVHTTAGTAGFGP
                . .*:*.:**:                 .:: * . .:  * *
BoxShade v3.31 C (beta, 970507) Output
AT4G28500.1     - - - - - - - - - - - - - M T W C N D R S D V Q T V E R I I P S P G A A E S P V A S L P V S C H - - - - K T C P S C G H
Sb025585_Sorbi1    R G R D R S S S S S S T A M T W C N S F N D V R A V E N N L A T A A A V A A A K K Q Q Q A S S H V N L I R T C P S C G H
 
AT4G28500.1     N F K F H E - - - Q A G I H D L P G L P A G V K F D P T D Q E V L E H L E G K V R D D A K K L H P L I D E F I R T I D G
Sb025585_Sorbi1    R A Q Y E Q V Q A A A T I Q D L P G L P A G V K F D P T D Q E L L E H L E G K A R P D A R K L H P L I D E F I P T I E G
 
AT4G28500.1     E N G I C Y T H P E K L P G V N K D G T V R H F F H R P S K A Y T T G T R K R R K V H T D S D V G G E T R W H K T G K T
Sb025585_Sorbi1    E N G I C Y T H P E R L P G V G K D G L I R H F F H R P S K A Y T T G T R K R R K V H T D E Q - G G E T R W H K T G K T
 
AT4G28500.1     R P V L A G G R V R G Y K K I L V L Y T N Y G K Q K K P E K T N W V M H Q Y H L G T S E E E K E G E L V V S K V F Y Q T
Sb025585_Sorbi1    R P V F T N G K L K G Y K K I L V L Y T N Y G K Q R K P E K T N W V M H Q Y H L G S D E E E K D G E L V V S K V F Y Q T
 
AT4G28500.1     Q P R Q C G G S V A A A A T A K D - R P Y L H G L G G G G G R H L H Y H L H H N N G N G K S N G S G G T A G A G E Y Y H
Sb025585_Sorbi1    Q P R Q C G - - - S G S A T A K D V V P L A A G L A T T D H H H H H H H H H H D D D D G - - - G N G G S A G I V D F Y -
 
AT4G28500.1     N I P A I I S F N Q T - - - - - - - - - - - - - - - - - G I Q N H L V H D S Q P F I P
Sb025585_Sorbi1    S P A A L I G Y N Q A V A P T N R A A A A A S A H L M P N F E V H T T A G T A G F G P
 
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