fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G28500.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm018943 not found in 326aa AT4G28500.1 1st_1st 0.642348754 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G28500.1     MTWCNDRSDVQTVERIIPSPGAAESPVASLPVSCHK---------TCPSCGHNFKFHEQA
gm018943_Glyma0 MTWCNDSDEERGIDQLVAPTITPTSTNNTTVLTDHRTKASEIRTLTCPSCGQNIEFQDQT
                ****** .: : :::::... :. *.  :  :: *:         ******:*::*::*:

AT4G28500.1     GIHDLPGLPAGVKFDPTDQEVLEHLEGKVRDDAKKLHPLIDEFIRTIDGENGICYTHPEK
gm018943_Glyma0 GINDLPGLPAGVKFDPNDQEILEHLEAKVLSDVPKLHPLIDEFIPTLEGENGICYTHPEK
                **:*************.***:*****.** .*. ********** *::************

AT4G28500.1     LPGVNKDGTVRHFFHRPSKAYTTGTRKRRKVHTDSDVGGETRWHKTGKTRPVLAGGRVRG
gm018943_Glyma0 LPGVRKDGQIRHFFHRPSKAYTTGTRKRRKVHTDEE-GSETRWHKTGKTRPVFVGGAVKG
                ****.*** :************************.: *.*************:.** *:*

AT4G28500.1     YKKILVLYTNYGKQKKPEKTNWVMHQYHLGTSEEEKEGELVVSKVFYQTQPRQCGGSVAA
gm018943_Glyma0 FKKILVLYTNYGRQKKPEKTNWVMHQYHLGTSEEEKDGELVVSKVFYQTQPRQCGNSIIK
                :***********:***********************:******************.*:  

AT4G28500.1     AATAKDRPYLHGLGGGGGRHLHYHLHHNNGNGKSNGSGGTAGAGEYYHNIPAIISFNQTG
gm018943_Glyma0 QDLYDEERLM----------TNQSVHNDDDNNIIPRNNNASALMDYYN--PSFINYDQLG
                    .:.  :           :  :*:::.*.    ...::.  :**:  *::*.::* *

AT4G28500.1     -----------IQNHLVH-DSQPFIP-------------
gm018943_Glyma0 GRSNRENSPQLIPNLVMQGDSSSFIRLAMDATKAKMDRK
                           * * ::: **..**
BoxShade v3.31 C (beta, 970507) Output
AT4G28500.1     M T W C N D R S D V Q T V E R I I P S P G A A E S P V A S L P V S C H K - - - - - - - - - T C P S C G H N F K F H E Q A
gm018943_Glyma0    M T W C N D S D E E R G I D Q L V A P T I T P T S T N N T T V L T D H R T K A S E I R T L T C P S C G Q N I E F Q D Q T
 
AT4G28500.1     G I H D L P G L P A G V K F D P T D Q E V L E H L E G K V R D D A K K L H P L I D E F I R T I D G E N G I C Y T H P E K
gm018943_Glyma0    G I N D L P G L P A G V K F D P N D Q E I L E H L E A K V L S D V P K L H P L I D E F I P T L E G E N G I C Y T H P E K
 
AT4G28500.1     L P G V N K D G T V R H F F H R P S K A Y T T G T R K R R K V H T D S D V G G E T R W H K T G K T R P V L A G G R V R G
gm018943_Glyma0    L P G V R K D G Q I R H F F H R P S K A Y T T G T R K R R K V H T D E E - G S E T R W H K T G K T R P V F V G G A V K G
 
AT4G28500.1     Y K K I L V L Y T N Y G K Q K K P E K T N W V M H Q Y H L G T S E E E K E G E L V V S K V F Y Q T Q P R Q C G G S V A A
gm018943_Glyma0    F K K I L V L Y T N Y G R Q K K P E K T N W V M H Q Y H L G T S E E E K D G E L V V S K V F Y Q T Q P R Q C G N S I I K
 
AT4G28500.1     A A T A K D R P Y L H G L G G G G G R H L H Y H L H H N N G N G K S N G S G G T A G A G E Y Y H N I P A I I S F N Q T G
gm018943_Glyma0    Q D L Y D E E R L M - - - - - - - - - - T N Q S V H N D D D N N I I P R N N N A S A L M D Y Y N - - P S F I N Y D Q L G
 
AT4G28500.1     - - - - - - - - - - - I Q N H L V H - D S Q P F I P - - - - - - - - - - - - -
gm018943_Glyma0    G R S N R E N S P Q L I P N L V M Q G D S S S F I R L A M D A T K A K M D R K
 
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