fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G28530.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os018069 not found in 278aa AT4G28530.1 1st_1st 0.408474576 Ia
Sb028185 not found in 543aa AT4G28530.1 1st_1st 0.405084745 Ia
Gm026708 not found in 296aa AT4G28530.1 1st_1st 0.459322033 Ia
Pt000039 not found in 285aa AT4G28530.1 1st_1st 0.450847457 Ia
Get sequence file
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G28530.1     ------MGLKDIGSKLPPGFRFHPSDEELVCHYLCNKIRAKSDHGDVDDDDDDVDE--AL
pt000039_POPTR_ ------MGLRDIGATLPPGFRFYPSDEELVCHYLYKKITN--------------EQ--VL
Os018069_Os04t0 ------MGLREIESTLPPGFRFYPSDEELVCHYLYKKVSN--------------ER--AS
gm026708_Glyma1 ------MGLRDIGASLPPGFRFYPSDEELVLHYLYKKITN--------------EE--VL
Sb028185_Sorbi1 LEQEIAMGLRDIELTLPPGFRFYPSDEELVCHYLHGKVAN--------------ERLAGA
                      ***::*  .*******:******* ***  *:                :.    

AT4G28530.1     KGSTDLVEIDLHICEPWELPDVAKLNAKEWYFFSFRDRKYATGYRTNRATVSGYWKATGK
pt000039_POPTR_ KGT--LVEVDLHTCEPWQLPEVAKLNATEWYFFSFRDRKYATGFRTNRATTTGYWKATGK
Os018069_Os04t0 QGT--LVEVDLHAREPWELPDVAKLTASEWYFFSFRDRKYATGSRTNRATKTGYWKATGK
gm026708_Glyma1 KGT--LMEIDLHTCEPWQLPEVAKLNANEWYFFSFRDRKYATGFRTNRATTSGYWKATGK
Sb028185_Sorbi1 GAA--MVEVDLHTHEPWELPDVAKLSTNEWYFFSFRDRKYATGLRTNRATKSGYWKATGK
                 .:  ::*:***  ***:**:****.:.*************** ****** :********

AT4G28530.1     DRTVMDPRT------RQLVGMRKTLVFYRNRAPNGIKTTWIMHEFRLECPNIPPKEDWVL
pt000039_POPTR_ DRTVLDPTT------REVVGMRKTLVFYRNRAPNGIKTGWIMHEFRLETPHMHPKEDWVL
Os018069_Os04t0 DREVRSPAT------RAVVGMRKTLVFYQGRAPNGVKSGWVMHEFRLDSPHSPPKEDWVL
gm026708_Glyma1 DRTVFDPAT------REVVGMRKTLVFYRNRAPNGIKTGWIMHEFRLETPHLPPKEDWVL
Sb028185_Sorbi1 DRVIHNPRAGGHHHHRAIVGMRKTLVFYRGRAPNGIKTSWVMHEFRMENPHTPPKEDWVL
                ** : .* :      * :**********:.*****:*: *:*****:: *:  *******

AT4G28530.1     CRVFNKGRDSS--------LQDNNYYNNDNQTQRLEVNDAPDLNYNNQLPPLLSSPPHNH
pt000039_POPTR_ CRVFHKCKA-----------EDYN--------AKFS----PQLMFETTTSSGTVN-----
Os018069_Os04t0 CRVFQKSKGDG--------EQDNP--------TSAA---SPAATFAGSS-----------
gm026708_Glyma1 CRVFHKGKA------------DNS--------AKL-------IMYESTVPSLTL------
Sb028185_Sorbi1 CRVFYKKKADAMDYAMADSEQD----------VGMH---MPRGGADSSS-----------
                **** * :             *                                      

AT4G28530.1     QHEKMKIQVCDQWEQLMKQPSRTTGHP-YHHH-----CHHQTIAC-GW---EQMM-----
pt000039_POPTR_ ---------------LAASPLST---------------DHQTLPC-GY---QQ-------
Os018069_Os04t0 ---------------QAAVPGQAAYSS-----------DDHTGSSMGFAPRQNEILDSSS
gm026708_Glyma1 -----------------ASSSPT---------------NQNTTPSIGY---NQFLAPFSS
Sb028185_Sorbi1 ---------------YSPPPFPALGGSHFHHHHLTPLTDHHGGGCL-----NNEFPGMAA
                                   .  :               ..:   .      ::       

AT4G28530.1     -------IGSLSSPSSH-------GPDHESLLNLLYVDNNNSVN-------ISGDHHQN-
pt000039_POPTR_ -------MTSLSSNPPH------QNQDQSSLLNLLQLSQDRNANPNIS-TDISSKAVDD-
Os018069_Os04t0 HQLLNLAMLQCNSVLDH-------FPQEV--------------NSSPM-MGLAGSIGIGD
gm026708_Glyma1 ------SMATHHHNHNHHIPNQSQNNNNNSLMGLLQFSRETNTNNSSTVTQISPKCDDNN
Sb028185_Sorbi1 LLQHNNGMFDPHVVQPH-------LHDSVVL-----------AGPPAA-AAAAGSTRDGG
                       :        *         :                .        : .   . 

AT4G28530.1     -Y---EKIL-LSSLDM-------TSLDHDKTCMGSSSDGGMVSDLHMECGGLS-FETEN-
pt000039_POPTR_ -Y---AFLWDDMNLEE-------TSL----------GDGVLASNLE----DMR-FEIDHN
Os018069_Os04t0 EY---GFFY-DTGFEE------TASL-----------------------GGMR-FPQGWS
gm026708_Glyma1 GY---GFLW-DMDLEE-------NSF----------NDGV-ASNLD----GMRFFELDNN
Sb028185_Sorbi1 EQCGSGVLM-DLGLDEHYTYNSYNSL-----------------------LQM--------
                       :    .::         *:                         :        

AT4G28530.1     ----ILAFQ
pt000039_POPTR_ SMVFI----
Os018069_Os04t0 ---------
gm026708_Glyma1 NSVVLL---
Sb028185_Sorbi1 ---------
BoxShade v3.31 C (beta, 970507) Output
AT4G28530.1     - - - - - - M G L K D I G S K L P P G F R F H P S D E E L V C H Y L C N K I R A K S D H G D V D D D D D D V D E - - A L
pt000039_POPTR_    - - - - - - M G L R D I G A T L P P G F R F Y P S D E E L V C H Y L Y K K I T N - - - - - - - - - - - - - - E Q - - V L
Os018069_Os04t0    - - - - - - M G L R E I E S T L P P G F R F Y P S D E E L V C H Y L Y K K V S N - - - - - - - - - - - - - - E R - - A S
gm026708_Glyma1    - - - - - - M G L R D I G A S L P P G F R F Y P S D E E L V L H Y L Y K K I T N - - - - - - - - - - - - - - E E - - V L
Sb028185_Sorbi1    L E Q E I A M G L R D I E L T L P P G F R F Y P S D E E L V C H Y L H G K V A N - - - - - - - - - - - - - - E R L A G A
 
AT4G28530.1     K G S T D L V E I D L H I C E P W E L P D V A K L N A K E W Y F F S F R D R K Y A T G Y R T N R A T V S G Y W K A T G K
pt000039_POPTR_    K G T - - L V E V D L H T C E P W Q L P E V A K L N A T E W Y F F S F R D R K Y A T G F R T N R A T T T G Y W K A T G K
Os018069_Os04t0    Q G T - - L V E V D L H A R E P W E L P D V A K L T A S E W Y F F S F R D R K Y A T G S R T N R A T K T G Y W K A T G K
gm026708_Glyma1    K G T - - L M E I D L H T C E P W Q L P E V A K L N A N E W Y F F S F R D R K Y A T G F R T N R A T T S G Y W K A T G K
Sb028185_Sorbi1    G A A - - M V E V D L H T H E P W E L P D V A K L S T N E W Y F F S F R D R K Y A T G L R T N R A T K S G Y W K A T G K
 
AT4G28530.1     D R T V M D P R T - - - - - - R Q L V G M R K T L V F Y R N R A P N G I K T T W I M H E F R L E C P N I P P K E D W V L
pt000039_POPTR_    D R T V L D P T T - - - - - - R E V V G M R K T L V F Y R N R A P N G I K T G W I M H E F R L E T P H M H P K E D W V L
Os018069_Os04t0    D R E V R S P A T - - - - - - R A V V G M R K T L V F Y Q G R A P N G V K S G W V M H E F R L D S P H S P P K E D W V L
gm026708_Glyma1    D R T V F D P A T - - - - - - R E V V G M R K T L V F Y R N R A P N G I K T G W I M H E F R L E T P H L P P K E D W V L
Sb028185_Sorbi1    D R V I H N P R A G G H H H H R A I V G M R K T L V F Y R G R A P N G I K T S W V M H E F R M E N P H T P P K E D W V L
 
AT4G28530.1     C R V F N K G R D S S - - - - - - - - L Q D N N Y Y N N D N Q T Q R L E V N D A P D L N Y N N Q L P P L L S S P P H N H
pt000039_POPTR_    C R V F H K C K A - - - - - - - - - - - E D Y N - - - - - - - - A K F S - - - - P Q L M F E T T T S S G T V N - - - - -
Os018069_Os04t0    C R V F Q K S K G D G - - - - - - - - E Q D N P - - - - - - - - T S A A - - - S P A A T F A G S S - - - - - - - - - - -
gm026708_Glyma1    C R V F H K G K A - - - - - - - - - - - - D N S - - - - - - - - A K L - - - - - - - I M Y E S T V P S L T L - - - - - -
Sb028185_Sorbi1    C R V F Y K K K A D A M D Y A M A D S E Q D - - - - - - - - - - V G M H - - - M P R G G A D S S S - - - - - - - - - - -
 
AT4G28530.1     Q H E K M K I Q V C D Q W E Q L M K Q P S R T T G H P - Y H H H - - - - - C H H Q T I A C - G W - - - E Q M M - - - - -
pt000039_POPTR_    - - - - - - - - - - - - - - - L A A S P L S T - - - - - - - - - - - - - - - D H Q T L P C - G Y - - - Q Q - - - - - - -
Os018069_Os04t0    - - - - - - - - - - - - - - - Q A A V P G Q A A Y S S - - - - - - - - - - - D D H T G S S M G F A P R Q N E I L D S S S
gm026708_Glyma1    - - - - - - - - - - - - - - - - - A S S S P T - - - - - - - - - - - - - - - N Q N T T P S I G Y - - - N Q F L A P F S S
Sb028185_Sorbi1    - - - - - - - - - - - - - - - Y S P P P F P A L G G S H F H H H H L T P L T D H H G G G C L - - - - - N N E F P G M A A
 
AT4G28530.1     - - - - - - - I G S L S S P S S H - - - - - - - G P D H E S L L N L L Y V D N N N S V N - - - - - - - I S G D H H Q N -
pt000039_POPTR_    - - - - - - - M T S L S S N P P H - - - - - - Q N Q D Q S S L L N L L Q L S Q D R N A N P N I S - T D I S S K A V D D -
Os018069_Os04t0    H Q L L N L A M L Q C N S V L D H - - - - - - - F P Q E V - - - - - - - - - - - - - - N S S P M - M G L A G S I G I G D
gm026708_Glyma1    - - - - - - S M A T H H H N H N H H I P N Q S Q N N N N N S L M G L L Q F S R E T N T N N S S T V T Q I S P K C D D N N
Sb028185_Sorbi1    L L Q H N N G M F D P H V V Q P H - - - - - - - L H D S V V L - - - - - - - - - - - A G P P A A - A A A A G S T R D G G
 
AT4G28530.1     - Y - - - E K I L - L S S L D M - - - - - - - T S L D H D K T C M G S S S D G G M V S D L H M E C G G L S - F E T E N -
pt000039_POPTR_    - Y - - - A F L W D D M N L E E - - - - - - - T S L - - - - - - - - - - G D G V L A S N L E - - - - D M R - F E I D H N
Os018069_Os04t0    E Y - - - G F F Y - D T G F E E - - - - - - T A S L - - - - - - - - - - - - - - - - - - - - - - - G G M R - F P Q G W S
gm026708_Glyma1    G Y - - - G F L W - D M D L E E - - - - - - - N S F - - - - - - - - - - N D G V - A S N L D - - - - G M R F F E L D N N
Sb028185_Sorbi1    E Q C G S G V L M - D L G L D E H Y T Y N S Y N S L - - - - - - - - - - - - - - - - - - - - - - - L Q M - - - - - - - -
 
AT4G28530.1     - - - - I L A F Q
pt000039_POPTR_    S M V F I - - - -
Os018069_Os04t0    - - - - - - - - -
gm026708_Glyma1    N S V V L L - - -
Sb028185_Sorbi1    - - - - - - - - -
 
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