fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G28530.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm026708 not found in 296aa AT4G28530.1 1st_1st 0.459322033 Ia
Gm052315 not found in 146aa AT4G28530.1 not_1st 0.427118644 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G28530.1     MGLKDIGSKLPPGFRFHPSDEELVCHYLCNKIRAKSDHGDVDDDDDDVDEALKGSTDLVE
gm052315_Glyma1 MGLRDIGASLPPGFRFYPSDEELVCHYLYKKIAN--------------EEVLKGT--LVE
gm026708_Glyma1 MGLRDIGASLPPGFRFYPSDEELVLHYLYKKITN--------------EEVLKGT--LME
                ***:***:.*******:******* *** :**                :*.***:  *:*

AT4G28530.1     IDLHICEPWELPDVAKLNAKEWYFFSFRDRKYATGYRTNRATVSGYWKATGKDRTVMDPR
gm052315_Glyma1 IDLHICEPWQLPEVAKLNANEWYFFSFRDRKYATGFRTNRATTSGYWKATGKDRTVVDPA
gm026708_Glyma1 IDLHTCEPWQLPEVAKLNANEWYFFSFRDRKYATGFRTNRATTSGYWKATGKDRTVFDPA
                **** ****:**:******:***************:******.*************.** 

AT4G28530.1     TRQLVGMRKTLVFYRNRAPNGIKTTWIMHEFRLECPNIPPKEDWVLCRVFNKGR-DSSLQ
gm052315_Glyma1 TQEVVGMRKTLVFYRNRAPNGIKTGWIMHEFRLETPHMPPKE------------------
gm026708_Glyma1 TREVVGMRKTLVFYRNRAPNGIKTGWIMHEFRLETPHLPPKEDWVLCRVFHKGKADNSAK
                *:::******************** ********* *::****                  

AT4G28530.1     DNNYYNN-----------DNQTQRLEVNDAPDLNYNNQLPPLLSS-PPHNHQHEKMKIQV
gm052315_Glyma1 ------------------------------------------------------------
gm026708_Glyma1 LIMYESTVPSLTLASSSPTNQ------NTTPSIGYNQFLAPFSSSMATHHHNH-------
                                                                            

AT4G28530.1     CDQWEQLMKQPSRTTGHPYHHHCHHQTIACGWEQMMIGSLSSPSSHGPDHESLLNLLY--
gm052315_Glyma1 ------------------------------------------------------------
gm026708_Glyma1 -------------------NHHIPNQ------------------SQNNNNNSLMGLLQFS
                                                                            

AT4G28530.1     --VDNNNSVNISG-----DHHQNYEKILLSSLDMTSLDHDKTCMGSSSDGGMVSDLHMEC
gm052315_Glyma1 ------------------------------------------------------------
gm026708_Glyma1 RETNTNNSSTVTQISPKCDDNNGYG--FLWDMDLEE---------NSFNDGVASNLD---
                                                                            

AT4G28530.1     GGLSFETEN----ILAFQ
gm052315_Glyma1 ------------------
gm026708_Glyma1 GMRFFELDNNNSVVLL--
BoxShade v3.31 C (beta, 970507) Output
AT4G28530.1     M G L K D I G S K L P P G F R F H P S D E E L V C H Y L C N K I R A K S D H G D V D D D D D D V D E A L K G S T D L V E
gm052315_Glyma1    M G L R D I G A S L P P G F R F Y P S D E E L V C H Y L Y K K I A N - - - - - - - - - - - - - - E E V L K G T - - L V E
gm026708_Glyma1    M G L R D I G A S L P P G F R F Y P S D E E L V L H Y L Y K K I T N - - - - - - - - - - - - - - E E V L K G T - - L M E
 
AT4G28530.1     I D L H I C E P W E L P D V A K L N A K E W Y F F S F R D R K Y A T G Y R T N R A T V S G Y W K A T G K D R T V M D P R
gm052315_Glyma1    I D L H I C E P W Q L P E V A K L N A N E W Y F F S F R D R K Y A T G F R T N R A T T S G Y W K A T G K D R T V V D P A
gm026708_Glyma1    I D L H T C E P W Q L P E V A K L N A N E W Y F F S F R D R K Y A T G F R T N R A T T S G Y W K A T G K D R T V F D P A
 
AT4G28530.1     T R Q L V G M R K T L V F Y R N R A P N G I K T T W I M H E F R L E C P N I P P K E D W V L C R V F N K G R - D S S L Q
gm052315_Glyma1    T Q E V V G M R K T L V F Y R N R A P N G I K T G W I M H E F R L E T P H M P P K E - - - - - - - - - - - - - - - - - -
gm026708_Glyma1    T R E V V G M R K T L V F Y R N R A P N G I K T G W I M H E F R L E T P H L P P K E D W V L C R V F H K G K A D N S A K
 
AT4G28530.1     D N N Y Y N N - - - - - - - - - - - D N Q T Q R L E V N D A P D L N Y N N Q L P P L L S S - P P H N H Q H E K M K I Q V
gm052315_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm026708_Glyma1    L I M Y E S T V P S L T L A S S S P T N Q - - - - - - N T T P S I G Y N Q F L A P F S S S M A T H H H N H - - - - - - -
 
AT4G28530.1     C D Q W E Q L M K Q P S R T T G H P Y H H H C H H Q T I A C G W E Q M M I G S L S S P S S H G P D H E S L L N L L Y - -
gm052315_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm026708_Glyma1    - - - - - - - - - - - - - - - - - - - N H H I P N Q - - - - - - - - - - - - - - - - - - S Q N N N N N S L M G L L Q F S
 
AT4G28530.1     - - V D N N N S V N I S G - - - - - D H H Q N Y E K I L L S S L D M T S L D H D K T C M G S S S D G G M V S D L H M E C
gm052315_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm026708_Glyma1    R E T N T N N S S T V T Q I S P K C D D N N G Y G - - F L W D M D L E E - - - - - - - - - N S F N D G V A S N L D - - -
 
AT4G28530.1     G G L S F E T E N - - - - I L A F Q
gm052315_Glyma1    - - - - - - - - - - - - - - - - - -
gm026708_Glyma1    G M R F F E L D N N N S V V L L - -
 
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