fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G28610.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm052337 not found in 484aa AT4G28610.1 1st_1st 0.416230366 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G28610.1     MEAR---PVHRSGSRDLTRT-------SSIPSTQKPSPVEDSFMR-SDNN-----SQLMS
gm052337_Glyma1 MEARSAFSIDRSNAKQLNNMGMSEAFPSSLPAL--PSPLEETYPKLSDSKPVFMEKELKT
                ****   .:.**.:::*..        **:*:   ***:*::: : **.:     .:* :

AT4G28610.1     RPLGQTYHLLSSSNGGAVGHICSSSSSGFATNLHYSTMVSHEKQ---QHYTGSSSNNAVQ
gm052337_Glyma1 KPYTHSSHLTSS---GAVGHM-FSSSPGYSTDLHHSSFSSHEKQPRNTHFISQSLSNMAS
                :*  :: ** **   *****:  ***.*::*:**:*:: *****    *: ..* .* ..

AT4G28610.1     TP------------------SNNDS-AWCHDSLPGGFLDFHETNPAIQNNCQIE--DGGI
gm052337_Glyma1 LPLSYSSNSEPIPSTTSTPYSNGNSVSWHTDSLP-SFLDF-PANTSIGNS-QVESSDCNI
                 *                  **.:* :*  **** .****  :*.:* *. *:*  * .*

AT4G28610.1     AAAFDDIQKRSDWHEWADHLITDDDPLMSTNWNDLLLETNSNSDSKDQK-TLQIP---QP
gm052337_Glyma1 MAT-EEYSKRNDWQEWADQLISDVDPLTS-NWNDLLADNIQDLEPKVAKSSSQLPIGHQS
                 *: :: .**.**:****:**:* *** * ****** :. .: :.*  * : *:*   *.

AT4G28610.1     QIVQQQPSPSVELRPVSTTSSNSNNGTGKARMRWTPELHEAFVEAVNSLGGSERATPKGV
gm052337_Glyma1 QSHQQLPASSGENRVGVAPTSSTNSAPAKPRMRWTPELHEAFVEAVNQLGGSERATPKGV
                *  ** *:.* * *   :.:*.:*....*.*****************.************

AT4G28610.1     LKIMKVEGLTIYHVKSHLQKYRTARYRPEPSETGSPERKLTPLEHITSLDLKGGIGITEA
gm052337_Glyma1 LKLMKVDGLTIYHVKSHLQKYRTARYRPESSE-GAAEKKLSPIEEMSSLDLKTGIEITEA
                **:***:**********************.** *:.*:**:*:*.::***** ** ****

AT4G28610.1     LRLQMEVQKQLHEQLEIQRNLQLRIEEQGKYLQMMFEKQ-NSGLTKGTASTS--------
gm052337_Glyma1 LRLQMEVQKRLHEQLEIQRNLQLRIEEQGRYLQMMFEKQCKPGIETFKASSSAIESQSGV
                *********:*******************:********* :.*: . .**:*        

AT4G28610.1     ------DSAAKSEQE----------------------------DKKTADSKEVPEEETRK
gm052337_Glyma1 SSDAIKDSPAKTESETIKVDHCKSGADQANGITTVEESALEVGEKQDAPESQASENPEQH
                      **.**:*.*                            :*: * ..:..*:  ::

AT4G28610.1     CEELESPQPKRPKIDN
gm052337_Glyma1 ASEDSAKASKRPRTEE
                ..* .:  .***: ::
BoxShade v3.31 C (beta, 970507) Output
AT4G28610.1     M E A R - - - P V H R S G S R D L T R T - - - - - - - S S I P S T Q K P S P V E D S F M R - S D N N - - - - - S Q L M S
gm052337_Glyma1    M E A R S A F S I D R S N A K Q L N N M G M S E A F P S S L P A L - - P S P L E E T Y P K L S D S K P V F M E K E L K T
 
AT4G28610.1     R P L G Q T Y H L L S S S N G G A V G H I C S S S S S G F A T N L H Y S T M V S H E K Q - - - Q H Y T G S S S N N A V Q
gm052337_Glyma1    K P Y T H S S H L T S S - - - G A V G H M - F S S S P G Y S T D L H H S S F S S H E K Q P R N T H F I S Q S L S N M A S
 
AT4G28610.1     T P - - - - - - - - - - - - - - - - - - S N N D S - A W C H D S L P G G F L D F H E T N P A I Q N N C Q I E - - D G G I
gm052337_Glyma1    L P L S Y S S N S E P I P S T T S T P Y S N G N S V S W H T D S L P - S F L D F - P A N T S I G N S - Q V E S S D C N I
 
AT4G28610.1     A A A F D D I Q K R S D W H E W A D H L I T D D D P L M S T N W N D L L L E T N S N S D S K D Q K - T L Q I P - - - Q P
gm052337_Glyma1    M A T - E E Y S K R N D W Q E W A D Q L I S D V D P L T S - N W N D L L A D N I Q D L E P K V A K S S S Q L P I G H Q S
 
AT4G28610.1     Q I V Q Q Q P S P S V E L R P V S T T S S N S N N G T G K A R M R W T P E L H E A F V E A V N S L G G S E R A T P K G V
gm052337_Glyma1    Q S H Q Q L P A S S G E N R V G V A P T S S T N S A P A K P R M R W T P E L H E A F V E A V N Q L G G S E R A T P K G V
 
AT4G28610.1     L K I M K V E G L T I Y H V K S H L Q K Y R T A R Y R P E P S E T G S P E R K L T P L E H I T S L D L K G G I G I T E A
gm052337_Glyma1    L K L M K V D G L T I Y H V K S H L Q K Y R T A R Y R P E S S E - G A A E K K L S P I E E M S S L D L K T G I E I T E A
 
AT4G28610.1     L R L Q M E V Q K Q L H E Q L E I Q R N L Q L R I E E Q G K Y L Q M M F E K Q - N S G L T K G T A S T S - - - - - - - -
gm052337_Glyma1    L R L Q M E V Q K R L H E Q L E I Q R N L Q L R I E E Q G R Y L Q M M F E K Q C K P G I E T F K A S S S A I E S Q S G V
 
AT4G28610.1     - - - - - - D S A A K S E Q E - - - - - - - - - - - - - - - - - - - - - - - - - - - - D K K T A D S K E V P E E E T R K
gm052337_Glyma1    S S D A I K D S P A K T E S E T I K V D H C K S G A D Q A N G I T T V E E S A L E V G E K Q D A P E S Q A S E N P E Q H
 
AT4G28610.1     C E E L E S P Q P K R P K I D N
gm052337_Glyma1    A S E D S A K A S K R P R T E E
 
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