fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G28640.1 SPIGNELELGLTLSLG at 32/246 in AT4G28640.1
SPIGNELELGLTLSLG at 32/302 in AT4G28640.2
SPIGNELELGLTLSLG at 32/250 in AT4G28640.3
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm026737 CPEESELELGLGLSLS in 24/287 AT2G33310.3 1st_not 0.422818791 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G28640.1     MEGGSASGSASALSNDENLVVSCEDSSSPIGNELELGLTLSLGRKG------YRDCRVY-
gm026737_Glyma1 ---------MSTVSKDDNLALSSEDSSCPEESELELGLGLSLSSGSSSKSHHHHHARIYT
                          *::*:*:**.:*.****.*  .****** ***.  .      ::..*:* 

AT4G28640.1     ----------ADDSSSSSSSSSLSRASVIAGIKR-TADSMAATS--GQVVGWPPIRTYRM
gm026737_Glyma1 AKDFPSSAAAAAAAASSPSSSSSSPNNITAGTKRAAADSLVANNRPSQVVGWPPLRTYRV
                          *  ::**.**** *  .: ** ** :***:.*..  .*******:****:

AT4G28640.1     NSMVNQAKASATEDPNLE-------ISQAVNKNRSDST-------KMRNSMFVKVTMDGI
gm026737_Glyma1 NSFNSHAKSTEVFNSVAEKSKTDNTVARKTNDNGNDNNINAKEKRHLRSSLFVKVNMDGI
                **: .:**:: . :.  *       ::: .*.* .*..       ::*.*:****.****

AT4G28640.1     PIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRTLETDGH-------METPVKILPDGSS
gm026737_Glyma1 PIGRKVDLSAHSSYETLAQTLEDMFNESTTVTTCKGSNGEDYGFIIGGERHSKLL-DGSS
                *****:**.**..**:*::***:** :..  :    ::*.        *   *:* ****

AT4G28640.1     GLVLTYEDKEGDWMLVGDVPWGMFIGSVRRLRIMKTSEATGKAQMIL----------
gm026737_Glyma1 KFVLTYEDKEGDWMLVGDVPWGMFFSSVRRLRIMRTSEANGLAPRLEENIKKRCKPI
                 :**********************:.********:****.* *  :
BoxShade v3.31 C (beta, 970507) Output
AT4G28640.1     M E G G S A S G S A S A L S N D E N L V V S C E D S S S P I G N E L E L G L T L S L G R K G - - - - - - Y R D C R V Y -
gm026737_Glyma1    - - - - - - - - - M S T V S K D D N L A L S S E D S S C P E E S E L E L G L G L S L S S G S S S K S H H H H H A R I Y T
 
AT4G28640.1     - - - - - - - - - - A D D S S S S S S S S S L S R A S V I A G I K R - T A D S M A A T S - - G Q V V G W P P I R T Y R M
gm026737_Glyma1    A K D F P S S A A A A A A A A S S P S S S S S S P N N I T A G T K R A A A D S L V A N N R P S Q V V G W P P L R T Y R V
 
AT4G28640.1     N S M V N Q A K A S A T E D P N L E - - - - - - - I S Q A V N K N R S D S T - - - - - - - K M R N S M F V K V T M D G I
gm026737_Glyma1    N S F N S H A K S T E V F N S V A E K S K T D N T V A R K T N D N G N D N N I N A K E K R H L R S S L F V K V N M D G I
 
AT4G28640.1     P I G R K I D L N A H K C Y E S L S N T L E E M F L K P K L G S R T L E T D G H - - - - - - - M E T P V K I L P D G S S
gm026737_Glyma1    P I G R K V D L S A H S S Y E T L A Q T L E D M F N E S T T V T T C K G S N G E D Y G F I I G G E R H S K L L - D G S S
 
AT4G28640.1     G L V L T Y E D K E G D W M L V G D V P W G M F I G S V R R L R I M K T S E A T G K A Q M I L - - - - - - - - - -
gm026737_Glyma1    K F V L T Y E D K E G D W M L V G D V P W G M F F S S V R R L R I M R T S E A N G L A P R L E E N I K K R C K P I
 
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