fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G28640.1 SPIGNELELGLTLSLG at 32/246 in AT4G28640.1
SPIGNELELGLTLSLG at 32/302 in AT4G28640.2
SPIGNELELGLTLSLG at 32/250 in AT4G28640.3
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt040422 SPDEGELELGLGLSLG in 39/289 AT4G28640.1 1st_1st 0.458612975 Ia
Pt040421 SPDEGELELGLGLSLG in 39/290 AT4G28640.2 not_not 0.458612975 III
Pt034335 YPVEAELELGLGLSLG in 42/303 AT2G33310.3 not_not 0.416107382 III
Pt041570 YPVEAELELGLSLGSG in 43/282 AT2G33310.3 not_not 0.413870246 III
Pt034336 YPVEAELELGLGLSLG in 42/277 AT2G33310.3 not_not 0.409395973 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G28640.1     -MEGG-----SASGSA------SALSNDENLVVSCEDSSSPIGNELELGLTL---SLGRK
pt040421_POPTR_ -MQGG-----FLGGGSGGSVCMSTVSMEDNVLMSSEDSSSPDEGELELGLGL---SLGGA
pt040422_POPTR_ -MQGG-----FLGGGSGGSVCMSTVSMEDNVLMSSEDSSSPDEGELELGLGL---SLGGA
pt034336_POPTR_ MMEGCLGLL-GGGGSSGASTNKSTLSKVE--VIEAEASSYPVEAELELGLGL---SLGSG
pt041570_POPTR_ MMAGGLGSLGGGGGSSGASTNDSTMSKVE--VVEAEASSYPVEAELELGLSLGSGGRGGG
pt034335_POPTR_ MMEGCLGLL-GGGGSSGASTNKSTLSKVE--VIEAEASSYPVEAELELGLGL---SLGSG
                 * *        .*.:      *::*  :  ::..* ** *   ****** *   . *  

AT4G28640.1     ------GYRDCR-VYAD-----------------DSSSSSSSSSLSRASVIAGIKRTADS
pt040421_POPTR_ SGFKDFGQRSSQ-QYARILTAKDLPSKVSSSSCCSSTTSSSSSTLSRANATAGTKRAADS
pt040422_POPTR_ SGFKDFGQRSSQ-QYARILTAKDLPSKVSSSSCCSSTTSSSSSTLSRANATAGTKRAADS
pt034336_POPTR_ GGGK--GKANAWGECGRILTAKDFPSV----------------------------RAADS
pt041570_POPTR_ GGGK--GKANARGERGRILTAKDFPSV----------------------------RAADS
pt034335_POPTR_ GGGK--GKANAWGECGRILTAKDFPSVVSQPQ--RPNNNNSMPSTCVVGAVSGTKRAADS
                      *  ..    .                                       *:***

AT4G28640.1     MAATSG------QVVGWPPIRTYRMNSMVNQAKASATEDPNLEISQAVNKNRS-------
pt040421_POPTR_ VSASNGA--ASSQVVGWPPIRSHRMHIMVNQAKSQATEEFN-----SMNKRKNAVEEKV-
pt040422_POPTR_ VSASNGA--A-SQVVGWPPIRSHRMHIMVNQAKSQATEEFN-----SMNKRKNAVEEKV-
pt034336_POPTR_ VSHEGGSPTAGSQVVGWPPIRAYRMNSLVSQAKAARAEEEK-GIG-EKDKSKENLKKKIC
pt041570_POPTR_ VSHEGGSPTAGSQVVGWPPIRAYRMNSLVNQAKAARAEEDK-GIG-EKDISKDNLKKKIC
pt034335_POPTR_ VSHEGGSPTAGSQVVGWPPIRAYRMNSLVSQAKAARAEEEK-GIG-EKDKSKENLKKKIC
                ::  .*      *********::**: :*.***:  :*: :       :  :.       

AT4G28640.1     --------DSTKMRNSMFVKVTMDGIPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRT
pt040421_POPTR_ -GNKNINIGNTKTRTSLFVKVNMDGTLIGRKVDLNAHGCYETLAQALENMFLR----TTT
pt040422_POPTR_ -GNKNINIGNTKTRTSLFVKVNMDGTLIGRKVDLNAHGCYETLAQALENMFLR----TTT
pt034336_POPTR_ NGNKTNATGNEKGHLG-FVKVNMDGVPIGRKVDLNAHACYETLAQALEEMFFR---STTT
pt041570_POPTR_ NGNKTSAPSNEKGHLG-FVKVNMDGIPIGRKVDLNAHACYETLAQALEEMFFR---SATT
pt034335_POPTR_ NGNKTNATGNEKGHLG-FVKVNMDGVPIGRKVDLNAHACYETLAQALEEMFFR---STTT
                        .. * : . ****.***  ****:***** ***:*:::**:**::    : *

AT4G28640.1     LETDGHMETPV-KILPD---------GSSGLVLTYEDKEGDWMLVGDVPWGMFIGSVRRL
pt040421_POPTR_ TLNMARLSTPEHKIMIDAKRHSQLLGGSSEFVLTYEDKDGDWMLVGDVPWGMFISSVKRL
pt040422_POPTR_ TLNMARLSTPEHKIMIDAKRHSQLLGGSSEFVLTYEDKDGDWMLVGDVPWGMFISSVKRL
pt034336_POPTR_ INSIGGQK-PLSK-------FSKLLDGSSEFVLTYEDKEGDWMLVGDVPWGMFLTSVKRL
pt041570_POPTR_ INSIGGEKRQVTK-------PSKLLDGLSEFLLTYEDKEGDWMLVGDVPWGMFLNSVKRL
pt034335_POPTR_ INSIGGQK-PLSK-------FSKLLDGSSEFVLTYEDKEGDWMLVGDVPWGMFLTSVKRL
                  . .  .    *             * * ::******:**************: **:**

AT4G28640.1     RIMKTSEATGKAQMIL-----------
pt040421_POPTR_ RIMRMSEATGLGK--------------
pt040422_POPTR_ RIMRMSEATGLGK--------------
pt034336_POPTR_ RIMRTSEANGLAPRLQDRNEKQRSKPV
pt041570_POPTR_ RIMRTSEANGLAPRFQDRNEKQRIKPV
pt034335_POPTR_ RIMRTSEANGLAPRLQDRNEKQRSKPV
                ***: ***.* .
BoxShade v3.31 C (beta, 970507) Output
AT4G28640.1     - M E G G - - - - - S A S G S A - - - - - - S A L S N D E N L V V S C E D S S S P I G N E L E L G L T L - - - S L G R K
pt040421_POPTR_    - M Q G G - - - - - F L G G G S G G S V C M S T V S M E D N V L M S S E D S S S P D E G E L E L G L G L - - - S L G G A
pt040422_POPTR_    - M Q G G - - - - - F L G G G S G G S V C M S T V S M E D N V L M S S E D S S S P D E G E L E L G L G L - - - S L G G A
pt034336_POPTR_    M M E G C L G L L - G G G G S S G A S T N K S T L S K V E - - V I E A E A S S Y P V E A E L E L G L G L - - - S L G S G
pt041570_POPTR_    M M A G G L G S L G G G G G S S G A S T N D S T M S K V E - - V V E A E A S S Y P V E A E L E L G L S L G S G G R G G G
pt034335_POPTR_    M M E G C L G L L - G G G G S S G A S T N K S T L S K V E - - V I E A E A S S Y P V E A E L E L G L G L - - - S L G S G
 
AT4G28640.1     - - - - - - G Y R D C R - V Y A D - - - - - - - - - - - - - - - - - D S S S S S S S S S L S R A S V I A G I K R T A D S
pt040421_POPTR_    S G F K D F G Q R S S Q - Q Y A R I L T A K D L P S K V S S S S C C S S T T S S S S S T L S R A N A T A G T K R A A D S
pt040422_POPTR_    S G F K D F G Q R S S Q - Q Y A R I L T A K D L P S K V S S S S C C S S T T S S S S S T L S R A N A T A G T K R A A D S
pt034336_POPTR_    G G G K - - G K A N A W G E C G R I L T A K D F P S V - - - - - - - - - - - - - - - - - - - - - - - - - - - - R A A D S
pt041570_POPTR_    G G G K - - G K A N A R G E R G R I L T A K D F P S V - - - - - - - - - - - - - - - - - - - - - - - - - - - - R A A D S
pt034335_POPTR_    G G G K - - G K A N A W G E C G R I L T A K D F P S V V S Q P Q - - R P N N N N S M P S T C V V G A V S G T K R A A D S
 
AT4G28640.1     M A A T S G - - - - - - Q V V G W P P I R T Y R M N S M V N Q A K A S A T E D P N L E I S Q A V N K N R S - - - - - - -
pt040421_POPTR_    V S A S N G A - - A S S Q V V G W P P I R S H R M H I M V N Q A K S Q A T E E F N - - - - - S M N K R K N A V E E K V -
pt040422_POPTR_    V S A S N G A - - A - S Q V V G W P P I R S H R M H I M V N Q A K S Q A T E E F N - - - - - S M N K R K N A V E E K V -
pt034336_POPTR_    V S H E G G S P T A G S Q V V G W P P I R A Y R M N S L V S Q A K A A R A E E E K - G I G - E K D K S K E N L K K K I C
pt041570_POPTR_    V S H E G G S P T A G S Q V V G W P P I R A Y R M N S L V N Q A K A A R A E E D K - G I G - E K D I S K D N L K K K I C
pt034335_POPTR_    V S H E G G S P T A G S Q V V G W P P I R A Y R M N S L V S Q A K A A R A E E E K - G I G - E K D K S K E N L K K K I C
 
AT4G28640.1     - - - - - - - - D S T K M R N S M F V K V T M D G I P I G R K I D L N A H K C Y E S L S N T L E E M F L K P K L G S R T
pt040421_POPTR_    - G N K N I N I G N T K T R T S L F V K V N M D G T L I G R K V D L N A H G C Y E T L A Q A L E N M F L R - - - - T T T
pt040422_POPTR_    - G N K N I N I G N T K T R T S L F V K V N M D G T L I G R K V D L N A H G C Y E T L A Q A L E N M F L R - - - - T T T
pt034336_POPTR_    N G N K T N A T G N E K G H L G - F V K V N M D G V P I G R K V D L N A H A C Y E T L A Q A L E E M F F R - - - S T T T
pt041570_POPTR_    N G N K T S A P S N E K G H L G - F V K V N M D G I P I G R K V D L N A H A C Y E T L A Q A L E E M F F R - - - S A T T
pt034335_POPTR_    N G N K T N A T G N E K G H L G - F V K V N M D G V P I G R K V D L N A H A C Y E T L A Q A L E E M F F R - - - S T T T
 
AT4G28640.1     L E T D G H M E T P V - K I L P D - - - - - - - - - G S S G L V L T Y E D K E G D W M L V G D V P W G M F I G S V R R L
pt040421_POPTR_    T L N M A R L S T P E H K I M I D A K R H S Q L L G G S S E F V L T Y E D K D G D W M L V G D V P W G M F I S S V K R L
pt040422_POPTR_    T L N M A R L S T P E H K I M I D A K R H S Q L L G G S S E F V L T Y E D K D G D W M L V G D V P W G M F I S S V K R L
pt034336_POPTR_    I N S I G G Q K - P L S K - - - - - - - F S K L L D G S S E F V L T Y E D K E G D W M L V G D V P W G M F L T S V K R L
pt041570_POPTR_    I N S I G G E K R Q V T K - - - - - - - P S K L L D G L S E F L L T Y E D K E G D W M L V G D V P W G M F L N S V K R L
pt034335_POPTR_    I N S I G G Q K - P L S K - - - - - - - F S K L L D G S S E F V L T Y E D K E G D W M L V G D V P W G M F L T S V K R L
 
AT4G28640.1     R I M K T S E A T G K A Q M I L - - - - - - - - - - -
pt040421_POPTR_    R I M R M S E A T G L G K - - - - - - - - - - - - - -
pt040422_POPTR_    R I M R M S E A T G L G K - - - - - - - - - - - - - -
pt034336_POPTR_    R I M R T S E A N G L A P R L Q D R N E K Q R S K P V
pt041570_POPTR_    R I M R T S E A N G L A P R F Q D R N E K Q R I K P V
pt034335_POPTR_    R I M R T S E A N G L A P R L Q D R N E K Q R S K P V
 
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