fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G29080.1 NFKATELRLGLPGSES at 43/305 in AT4G29080.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm025343 NLKATELRLGLPGSES in 36/307 AT4G29080.1 1st_1st 0.522998296 Ia
Pt011954 NLKETELRLGLPGYQS in 60/349 AT4G29080.1 1st_1st 0.509369676 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G29080.1     MSVSVAAEHDYIGLSEFPTMEATTMSDK-------------------TKTRDNNNGLNFK
pt011954_POPTR_ MSSIP-KEHDYIGLSETPSMEK--ISDKLSSSSSTLSTEENINSNSNSNSNSTNTSLNLK
gm025343_Glyma0 MSVSL-EQEGYVGLSEVPAMEG--CSER------------------------TGGGLNLK
                **     :..*:**** *:**    *::                        .. .**:*

AT4G29080.1     ATELRLGLPGSESPERV------------------DSRFLALNKSSCPVSGAKRVFSDAI
pt011954_POPTR_ ETELRLGLPGYQSPERKLTLPAAGVSLFGKDIDTNNTNGYPLRPLKNLVSGTKRGFSDAI
gm025343_Glyma0 ATELRLGLPGSESPERE-----EGVE---------DKNVHPLGMVKCLVSGAKRGFSDTI
                 ********* :****                   :..  .*   .  ***:** ***:*

AT4G29080.1     -NDSNKWVFSPGSTTATGDVGSGSG---PR-----------------TSVVKDGKSTTFT
pt011954_POPTR_ VGSSGKWVFS-GSNGSEVDLGKGAILFSPRG---------DNGNSQKSCVAGPAKKDDVA
gm025343_Glyma0 DGGSGKWLLS-GNSGSEVGLGKDGGFFSPRGVGVSVSAAKAECTNQQTCVV----KDKVP
                 ..*.**::* *.. :  .:*...    **                 :.*.    .  ..

AT4G29080.1     KPAVPVKEKKSSA-------TAPASKAQVVGWPPIRSFRKNSMASSQSQKPGNNSETEEA
pt011954_POPTR_ QSPKPVQEKISQVAAANENSSAPAAKAQVVGWPPIRSFRKNTMASSLVK---NN---EDV
gm025343_Glyma0 QSPKPLNEKKPQI-------SAPAAKEQVVGWPPIRSFRKNSMATQPQK---ND---DNA
                :.. *::** ..        :***:* **************:**:.  :   *:   ::.

AT4G29080.1     EAKSGPEQPCLYVKVSMEGAPYLRKIDLKTYKSYLELSSALEKMFSCFTIGQFGSHGGCG
pt011954_POPTR_ EGKSG--YGCLYVKVSMDGAPYLRKVDLKTYSNYLELSSALEKMFSCFTIGQCGSHGLRG
gm025343_Glyma0 EAKS----VCLYVKVSMDGAPYLRKVDLKNFGTYMELSSALEKMFSCFTISQCGSHGVCG
                *.**     ********:*******:***.: .*:***************.* ****  *

AT4G29080.1     RDGLNESRLTDLLRGSEYVVTYEDKDSDWMLVGDVPWEMFICSCKKLRIMKSSEAIGLAP
pt011954_POPTR_ QDGLTESRLKDILHGSEYVLTYEDKDGDWMLVGDVPWDMFTNSCRRLRIMKGSEAIGLAP
gm025343_Glyma0 RDKLTENRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDSCKRLRIMKSSEAIGLAP
                :* *.*.** *:*:*****:******.**********:**  **::*****.********

AT4G29080.1     RVMEKCRSRN
pt011954_POPTR_ RAMEKCKNRN
gm025343_Glyma0 RAMEKCKSRN
                *.****:.**
BoxShade v3.31 C (beta, 970507) Output
AT4G29080.1     M S V S V A A E H D Y I G L S E F P T M E A T T M S D K - - - - - - - - - - - - - - - - - - - T K T R D N N N G L N F K
pt011954_POPTR_    M S S I P - K E H D Y I G L S E T P S M E K - - I S D K L S S S S S T L S T E E N I N S N S N S N S N S T N T S L N L K
gm025343_Glyma0    M S V S L - E Q E G Y V G L S E V P A M E G - - C S E R - - - - - - - - - - - - - - - - - - - - - - - - T G G G L N L K
 
AT4G29080.1     A T E L R L G L P G S E S P E R V - - - - - - - - - - - - - - - - - - D S R F L A L N K S S C P V S G A K R V F S D A I
pt011954_POPTR_    E T E L R L G L P G Y Q S P E R K L T L P A A G V S L F G K D I D T N N T N G Y P L R P L K N L V S G T K R G F S D A I
gm025343_Glyma0    A T E L R L G L P G S E S P E R E - - - - - E G V E - - - - - - - - - D K N V H P L G M V K C L V S G A K R G F S D T I
 
AT4G29080.1     - N D S N K W V F S P G S T T A T G D V G S G S G - - - P R - - - - - - - - - - - - - - - - - T S V V K D G K S T T F T
pt011954_POPTR_    V G S S G K W V F S - G S N G S E V D L G K G A I L F S P R G - - - - - - - - - D N G N S Q K S C V A G P A K K D D V A
gm025343_Glyma0    D G G S G K W L L S - G N S G S E V G L G K D G G F F S P R G V G V S V S A A K A E C T N Q Q T C V V - - - - K D K V P
 
AT4G29080.1     K P A V P V K E K K S S A - - - - - - - T A P A S K A Q V V G W P P I R S F R K N S M A S S Q S Q K P G N N S E T E E A
pt011954_POPTR_    Q S P K P V Q E K I S Q V A A A N E N S S A P A A K A Q V V G W P P I R S F R K N T M A S S L V K - - - N N - - - E D V
gm025343_Glyma0    Q S P K P L N E K K P Q I - - - - - - - S A P A A K E Q V V G W P P I R S F R K N S M A T Q P Q K - - - N D - - - D N A
 
AT4G29080.1     E A K S G P E Q P C L Y V K V S M E G A P Y L R K I D L K T Y K S Y L E L S S A L E K M F S C F T I G Q F G S H G G C G
pt011954_POPTR_    E G K S G - - Y G C L Y V K V S M D G A P Y L R K V D L K T Y S N Y L E L S S A L E K M F S C F T I G Q C G S H G L R G
gm025343_Glyma0    E A K S - - - - V C L Y V K V S M D G A P Y L R K V D L K N F G T Y M E L S S A L E K M F S C F T I S Q C G S H G V C G
 
AT4G29080.1     R D G L N E S R L T D L L R G S E Y V V T Y E D K D S D W M L V G D V P W E M F I C S C K K L R I M K S S E A I G L A P
pt011954_POPTR_    Q D G L T E S R L K D I L H G S E Y V L T Y E D K D G D W M L V G D V P W D M F T N S C R R L R I M K G S E A I G L A P
gm025343_Glyma0    R D K L T E N R L M D L L H G S E Y V L T Y E D K D G D W M L V G D V P W E M F T D S C K R L R I M K S S E A I G L A P
 
AT4G29080.1     R V M E K C R S R N
pt011954_POPTR_    R A M E K C K N R N
gm025343_Glyma0    R A M E K C K S R N
 
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