fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G29080.1 NFKATELRLGLPGSES at 43/305 in AT4G29080.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os024773 AALATELRLGLPGTAE in 23/266 AT4G29080.1 1st_1st 0.398637137 Ib
YKNYKELSLALEKMFS in 172/266
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G29080.1     MSVSVAAEHDYIGLSEFPTMEATTMSDKTKTRDNNNGLNFKATELRLGLPGS-ESPER--
Os024773_Os06t0 --MAPPQERDYIGLS--PAAAAAL-----------------ATELRLGLPGTAEEAESEG
                  :: . *:******  *:  *:                  **********: *..*   

AT4G29080.1     -----VDSRFLALNKSSCPVSGAKRVFSDAINDSNKWVFSPGSTTATGDVGSGSGPRTSV
Os024773_Os06t0 GGGGGTDAAPLTL--ELLPKGGAKRGFADAI------------------VGGPAGQRREA
                     .*:  *:*  .  * .**** *:***                  **. :* * ..

AT4G29080.1     VKDGKSTTFTKPAVPVKEKKSSATAPASKAQVVGWPPIRSFRKNSMASSQSQKPGNNSET
Os024773_Os06t0 A-GGKAAAAAAEAEEEEEKK-KAQAPAAKAQVVGWPPIRSYRKNTMAMSQPALKGK----
                . .**::: :  *   :*** .* ***:************:***:** **.   *:    

AT4G29080.1     EEAEAKSGPEQPCLYVKVSMEGAPYLRKIDLKTYKSYLELSSALEKMFSCFTIGQFGSHG
Os024773_Os06t0 DDGEAKQAPASGCLYVKVSMDGAPYLRKVDLKMYKNYKELSLALEKMFSCFTVGHGESNG
                ::.***..* . ********:*******:*** **.* *** **********:*:  *:*

AT4G29080.1     GCGRDGLNESRLTDLLRGSEYVVTYEDKDSDWMLVGDVPWEMFICSCKKLRIMKSSEAIG
Os024773_Os06t0 KSGRDGLSDCRLMDLKNGTELVLTYEDKDEDWMLVGDVPWRMFTDSCRRLRIMKGSDAVG
                 .*****.:.** ** .*:* *:******.**********.**  **::*****.*:*:*

AT4G29080.1     LAPRVMEKCRSRN
Os024773_Os06t0 LAPRATDKSKNRN
                ****. :*.:.**
BoxShade v3.31 C (beta, 970507) Output
AT4G29080.1     M S V S V A A E H D Y I G L S E F P T M E A T T M S D K T K T R D N N N G L N F K A T E L R L G L P G S - E S P E R - -
Os024773_Os06t0    - - M A P P Q E R D Y I G L S - - P A A A A A L - - - - - - - - - - - - - - - - - A T E L R L G L P G T A E E A E S E G
 
AT4G29080.1     - - - - - V D S R F L A L N K S S C P V S G A K R V F S D A I N D S N K W V F S P G S T T A T G D V G S G S G P R T S V
Os024773_Os06t0    G G G G G T D A A P L T L - - E L L P K G G A K R G F A D A I - - - - - - - - - - - - - - - - - - V G G P A G Q R R E A
 
AT4G29080.1     V K D G K S T T F T K P A V P V K E K K S S A T A P A S K A Q V V G W P P I R S F R K N S M A S S Q S Q K P G N N S E T
Os024773_Os06t0    A - G G K A A A A A A E A E E E E E K K - K A Q A P A A K A Q V V G W P P I R S Y R K N T M A M S Q P A L K G K - - - -
 
AT4G29080.1     E E A E A K S G P E Q P C L Y V K V S M E G A P Y L R K I D L K T Y K S Y L E L S S A L E K M F S C F T I G Q F G S H G
Os024773_Os06t0    D D G E A K Q A P A S G C L Y V K V S M D G A P Y L R K V D L K M Y K N Y K E L S L A L E K M F S C F T V G H G E S N G
 
AT4G29080.1     G C G R D G L N E S R L T D L L R G S E Y V V T Y E D K D S D W M L V G D V P W E M F I C S C K K L R I M K S S E A I G
Os024773_Os06t0    K S G R D G L S D C R L M D L K N G T E L V L T Y E D K D E D W M L V G D V P W R M F T D S C R R L R I M K G S D A V G
 
AT4G29080.1     L A P R V M E K C R S R N
Os024773_Os06t0    L A P R A T D K S K N R N
 
0