fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G29080.1 NFKATELRLGLPGSES at 43/305 in AT4G29080.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt039771 NLKATELRLGLPGSQS in 72/366 AT5G65670.2 not_not 0.461669505 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G29080.1     MS--------------VSVAA----------------EHDYIGLSEFPTMEATTMSDKTK
pt039771_POPTR_ MSPPLLGVVEEEGHSNVTLLASPASAESACLNGLELKERNYMGLSDCSSVDSSAVSAASD
                **              *:: *                *::*:***: .:::::::*  :.

AT4G29080.1     TRDNNNGLNFKATELRLGLPGSESPER-----------VDSR-FLALNKSS---------
pt039771_POPTR_ ERKTS--LNLKATELRLGLPGSQSPERNHELSLLSSALLDEKPFFPLHPSNDGHYSSTQK
                 *...  **:************:****           :*.: *:.*: *.         

AT4G29080.1     CPVSGAKRVFSDAINDSNKWVFSPGSTTATGDVGSGSGPRTSV---VKDGKSTTFTKPAV
pt039771_POPTR_ NVVSGNKRVFSDAMDE-----FSESKFLSNSEVNAMLSPRPSPNMGLKPGMLENLGVQQA
                  *** *******:::     ** ..  :..:*.:  .**.*    :* *   .:    .

AT4G29080.1     PVKE--------------------KKSSA---TAPASKAQVVGWPPIRSFRKNSMASSQS
pt039771_POPTR_ KVKEIVAPKAGQERPHAANETRPLRNSSANNSSAPAPKAQVVGWPPIKSFRKNSLATT--
                 ***                    ::***   :***.**********:******:*::  

AT4G29080.1     QKPGNNSETEEAEAKSGPEQPCLYVKVSMEGAPYLRKIDLKTYKSYLELSSALEKMFSCF
pt039771_POPTR_ -----SKNTEEVDGKAGPG--ALFIKVSMDGAPYLRKVDLRNYSAYQELSSALEKMFSCF
                     ..:***.:.*:**   .*::****:*******:**:.*.:* *************

AT4G29080.1     TIGQFGSHGGCGRDGLNESRLTDLLRGSEYVVTYEDKDSDWMLVGDVPWEMFICSCKKLR
pt039771_POPTR_ TIGQYGSHGAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIETCKRLR
                ****:****. **: *.**:*.***:*****:******.************** :**:**

AT4G29080.1     IMKSSEAIGLAPRVMEKCRSRN
pt039771_POPTR_ IMKSSDAIGLAPRAMEKCKNRN
                *****:*******.****:.**
BoxShade v3.31 C (beta, 970507) Output
AT4G29080.1     M S - - - - - - - - - - - - - - V S V A A - - - - - - - - - - - - - - - - E H D Y I G L S E F P T M E A T T M S D K T K
pt039771_POPTR_    M S P P L L G V V E E E G H S N V T L L A S P A S A E S A C L N G L E L K E R N Y M G L S D C S S V D S S A V S A A S D
 
AT4G29080.1     T R D N N N G L N F K A T E L R L G L P G S E S P E R - - - - - - - - - - - V D S R - F L A L N K S S - - - - - - - - -
pt039771_POPTR_    E R K T S - - L N L K A T E L R L G L P G S Q S P E R N H E L S L L S S A L L D E K P F F P L H P S N D G H Y S S T Q K
 
AT4G29080.1     C P V S G A K R V F S D A I N D S N K W V F S P G S T T A T G D V G S G S G P R T S V - - - V K D G K S T T F T K P A V
pt039771_POPTR_    N V V S G N K R V F S D A M D E - - - - - F S E S K F L S N S E V N A M L S P R P S P N M G L K P G M L E N L G V Q Q A
 
AT4G29080.1     P V K E - - - - - - - - - - - - - - - - - - - - K K S S A - - - T A P A S K A Q V V G W P P I R S F R K N S M A S S Q S
pt039771_POPTR_    K V K E I V A P K A G Q E R P H A A N E T R P L R N S S A N N S S A P A P K A Q V V G W P P I K S F R K N S L A T T - -
 
AT4G29080.1     Q K P G N N S E T E E A E A K S G P E Q P C L Y V K V S M E G A P Y L R K I D L K T Y K S Y L E L S S A L E K M F S C F
pt039771_POPTR_    - - - - - S K N T E E V D G K A G P G - - A L F I K V S M D G A P Y L R K V D L R N Y S A Y Q E L S S A L E K M F S C F
 
AT4G29080.1     T I G Q F G S H G G C G R D G L N E S R L T D L L R G S E Y V V T Y E D K D S D W M L V G D V P W E M F I C S C K K L R
pt039771_POPTR_    T I G Q Y G S H G A P G R E M L S E S K L K D L L H G S E Y V L T Y E D K D G D W M L V G D V P W E M F I E T C K R L R
 
AT4G29080.1     I M K S S E A I G L A P R V M E K C R S R N
pt039771_POPTR_    I M K S S D A I G L A P R A M E K C K N R N
 
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