fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G29080.1 NFKATELRLGLPGSES at 43/305 in AT4G29080.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt011954 NLKETELRLGLPGYQS in 60/349 AT4G29080.1 1st_1st 0.509369676 Ia
Pt005605 NLKATELRLGLPGSDS in 44/307 AT4G29080.1 not_1st 0.502555366 II
Pt030401 NMKETELRLGLPGSQS in 66/335 AT4G29080.1 not_1st 0.494037478 II
Pt039771 NLKATELRLGLPGSQS in 72/366 AT5G65670.2 not_not 0.461669505 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G29080.1     MSVSVA--------------------------------AEHDYIGL-SEFPTMEATT---
pt005605_POPTR_ --MSMP--------------------------------LEHDYIGISSEVSSMENTSG--
pt030401_POPTR_ -MYSIP--------------------------------KEHDYIGL-SETPSMENISEKL
pt011954_POPTR_ -MSSIP--------------------------------KEHDYIGL-SETPSMEKISDKL
pt039771_POPTR_ --MSPPLLGVVEEEGHSNVTLLASPASAESACLNGLELKERNYMGL-SDCSSVDS-----
                   * .                                 *::*:*: *: .:::      

AT4G29080.1     --------------------MSDKTKTRDNNNGLNFKATELRLGLPGSESPER---VDSR
pt005605_POPTR_ --------------------TDTINISTTASKGLNLKATELRLGLPGSDSPERGNENQQL
pt030401_POPTR_ SSSSTSSSTLSTEEKNNSSSSNSNNNNKNNNTSLNMKETELRLGLPGSQSPERKPTVPAA
pt011954_POPTR_ SS---SSSTLSTEENIN---SNSNSNSNSTNTSLNLKETELRLGLPGYQSPERKLTLPAA
pt039771_POPTR_ --------------------SAVSAASDERKTSLNLKATELRLGLPGSQSPERNHELSLL
                                          .   ...**:* ********* :****       

AT4G29080.1     FLAL------------NKSSCP-------VSGAKRVFSDAIN-DSNKWVFSPGSTTA---
pt005605_POPTR_ GFSL-----------NNNNSKD----KSFVSGARRGFSVAIHGGSANWVFS-GNAGS---
pt030401_POPTR_ GVSLVGKD----IDTNNTNAYSLIPVKNLVSGAKRVFSDAIDGSTGKWVFS-G-------
pt011954_POPTR_ GVSLFGKD----IDTNNTNGYPLRPLKNLVSGTKRGFSDAIVGSSGKWVFS-GSNGS---
pt039771_POPTR_ SSALLDEKPFFPLHPSNDGHYS-STQKNVVSGNKRVFSDAMDEFSESKFLSNSEVNAMLS
                  :*            * .          *** :* ** *:   : . .:* .       

AT4G29080.1     ---TGDV----------GSGSGPRTSVVKD-GKST--TFTKPAVP-VKEKKSS-------
pt005605_POPTR_ ---DPN-------FSLRGAN-----------SGKE--GFPHSSKPVVQENKSQVDGANTN
pt030401_POPTR_ -----------------GDNGNPQKSRVAGPAKK---DVAQSPKP-VQEKNSQVAAANEN
pt011954_POPTR_ ---EVDLGKGAILFSPRGDNGNSQKSCVAGPAKKD--DVAQSPKP-VQEKISQVAAANEN
pt039771_POPTR_ PRPSPNMGLKPGMLENLGVQQAKVKEIVAPKAGQERPHAANETRP-LRNSSAN------N
                                 *             . .     .: . * :::. :.       

AT4G29080.1     --ATAPASKAQVVGWPPIRSFRKNSMASSQSQKPGNNSETEEAEAKSGPEQPCLYVKVSM
pt005605_POPTR_ GHGAAPASKAQVVGWPPIRSFRKNTMASHLSK---ND---DGAEVKSG--SGCLYVKVSM
pt030401_POPTR_ --SSAPAAKTQVVGWPPIRSFRKNTMASSLAK---NN---EDVDGKSG--YGYLYVKVSM
pt011954_POPTR_ --SSAPAAKAQVVGWPPIRSFRKNTMASSLVK---NN---EDVEGKSG--YGCLYVKVSM
pt039771_POPTR_ --SSAPAPKAQVVGWPPIKSFRKNSLATT-SK---NT---EEVDGKAG--PGALFIKVSM
                  .:***.*:********:*****::*:   :   *    : .: *:*     *::****

AT4G29080.1     EGAPYLRKIDLKTYKSYLELSSALEKMFSCFTIGQFGSHGGCGRDGLNESRLTDLLRGSE
pt005605_POPTR_ DGAPYLRKVDLKTFGSYMELSSALEKMFSCFTIGQCGSHVVPGQDGLSESRLMDLLHGSE
pt030401_POPTR_ DGAPYLRKVDLKTYGNYLELSSALEKMFGCFTIGQCGSHGLAARDGLTESCLKD-LHGSE
pt011954_POPTR_ DGAPYLRKVDLKTYSNYLELSSALEKMFSCFTIGQCGSHGLRGQDGLTESRLKDILHGSE
pt039771_POPTR_ DGAPYLRKVDLRNYSAYQELSSALEKMFSCFTIGQYGSHGAPGREMLSESKLKDLLHGSE
                :*******:**:.:  * **********.****** ***   .:: *.** * * *:***

AT4G29080.1     YVVTYEDKDSDWMLVGDVPWEMFICSCKKLRIMKSSEAIGLAPRVMEKCRSRN
pt005605_POPTR_ YVLTYEDKDNDWMLVGDVPWKMFTDSCRRLRIMKGSEAIGLAPRAMEKCKSRN
pt030401_POPTR_ YVLTFEDKDGDWMLVGDVPWDMFTDSCRRLRIMKGSEAIGLAPRAMEKCKNRN
pt011954_POPTR_ YVLTYEDKDGDWMLVGDVPWDMFTNSCRRLRIMKGSEAIGLAPRAMEKCKNRN
pt039771_POPTR_ YVLTYEDKDGDWMLVGDVPWEMFIETCKRLRIMKSSDAIGLAPRAMEKCKNRN
                **:*:****.**********.**  :*::*****.*:*******.****:.**
BoxShade v3.31 C (beta, 970507) Output
AT4G29080.1     M S V S V A - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - A E H D Y I G L - S E F P T M E A T T - - -
pt005605_POPTR_    - - M S M P - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - L E H D Y I G I S S E V S S M E N T S G - -
pt030401_POPTR_    - M Y S I P - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - K E H D Y I G L - S E T P S M E N I S E K L
pt011954_POPTR_    - M S S I P - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - K E H D Y I G L - S E T P S M E K I S D K L
pt039771_POPTR_    - - M S P P L L G V V E E E G H S N V T L L A S P A S A E S A C L N G L E L K E R N Y M G L - S D C S S V D S - - - - -
 
AT4G29080.1     - - - - - - - - - - - - - - - - - - - - M S D K T K T R D N N N G L N F K A T E L R L G L P G S E S P E R - - - V D S R
pt005605_POPTR_    - - - - - - - - - - - - - - - - - - - - T D T I N I S T T A S K G L N L K A T E L R L G L P G S D S P E R G N E N Q Q L
pt030401_POPTR_    S S S S T S S S T L S T E E K N N S S S S N S N N N N K N N N T S L N M K E T E L R L G L P G S Q S P E R K P T V P A A
pt011954_POPTR_    S S - - - S S S T L S T E E N I N - - - S N S N S N S N S T N T S L N L K E T E L R L G L P G Y Q S P E R K L T L P A A
pt039771_POPTR_    - - - - - - - - - - - - - - - - - - - - S A V S A A S D E R K T S L N L K A T E L R L G L P G S Q S P E R N H E L S L L
 
AT4G29080.1     F L A L - - - - - - - - - - - - N K S S C P - - - - - - - V S G A K R V F S D A I N - D S N K W V F S P G S T T A - - -
pt005605_POPTR_    G F S L - - - - - - - - - - - N N N N S K D - - - - K S F V S G A R R G F S V A I H G G S A N W V F S - G N A G S - - -
pt030401_POPTR_    G V S L V G K D - - - - I D T N N T N A Y S L I P V K N L V S G A K R V F S D A I D G S T G K W V F S - G - - - - - - -
pt011954_POPTR_    G V S L F G K D - - - - I D T N N T N G Y P L R P L K N L V S G T K R G F S D A I V G S S G K W V F S - G S N G S - - -
pt039771_POPTR_    S S A L L D E K P F F P L H P S N D G H Y S - S T Q K N V V S G N K R V F S D A M D E F S E S K F L S N S E V N A M L S
 
AT4G29080.1     - - - T G D V - - - - - - - - - - G S G S G P R T S V V K D - G K S T - - T F T K P A V P - V K E K K S S - - - - - - -
pt005605_POPTR_    - - - D P N - - - - - - - F S L R G A N - - - - - - - - - - - S G K E - - G F P H S S K P V V Q E N K S Q V D G A N T N
pt030401_POPTR_    - - - - - - - - - - - - - - - - - G D N G N P Q K S R V A G P A K K - - - D V A Q S P K P - V Q E K N S Q V A A A N E N
pt011954_POPTR_    - - - E V D L G K G A I L F S P R G D N G N S Q K S C V A G P A K K D - - D V A Q S P K P - V Q E K I S Q V A A A N E N
pt039771_POPTR_    P R P S P N M G L K P G M L E N L G V Q Q A K V K E I V A P K A G Q E R P H A A N E T R P - L R N S S A N - - - - - - N
 
AT4G29080.1     - - A T A P A S K A Q V V G W P P I R S F R K N S M A S S Q S Q K P G N N S E T E E A E A K S G P E Q P C L Y V K V S M
pt005605_POPTR_    G H G A A P A S K A Q V V G W P P I R S F R K N T M A S H L S K - - - N D - - - D G A E V K S G - - S G C L Y V K V S M
pt030401_POPTR_    - - S S A P A A K T Q V V G W P P I R S F R K N T M A S S L A K - - - N N - - - E D V D G K S G - - Y G Y L Y V K V S M
pt011954_POPTR_    - - S S A P A A K A Q V V G W P P I R S F R K N T M A S S L V K - - - N N - - - E D V E G K S G - - Y G C L Y V K V S M
pt039771_POPTR_    - - S S A P A P K A Q V V G W P P I K S F R K N S L A T T - S K - - - N T - - - E E V D G K A G - - P G A L F I K V S M
 
AT4G29080.1     E G A P Y L R K I D L K T Y K S Y L E L S S A L E K M F S C F T I G Q F G S H G G C G R D G L N E S R L T D L L R G S E
pt005605_POPTR_    D G A P Y L R K V D L K T F G S Y M E L S S A L E K M F S C F T I G Q C G S H V V P G Q D G L S E S R L M D L L H G S E
pt030401_POPTR_    D G A P Y L R K V D L K T Y G N Y L E L S S A L E K M F G C F T I G Q C G S H G L A A R D G L T E S C L K D - L H G S E
pt011954_POPTR_    D G A P Y L R K V D L K T Y S N Y L E L S S A L E K M F S C F T I G Q C G S H G L R G Q D G L T E S R L K D I L H G S E
pt039771_POPTR_    D G A P Y L R K V D L R N Y S A Y Q E L S S A L E K M F S C F T I G Q Y G S H G A P G R E M L S E S K L K D L L H G S E
 
AT4G29080.1     Y V V T Y E D K D S D W M L V G D V P W E M F I C S C K K L R I M K S S E A I G L A P R V M E K C R S R N
pt005605_POPTR_    Y V L T Y E D K D N D W M L V G D V P W K M F T D S C R R L R I M K G S E A I G L A P R A M E K C K S R N
pt030401_POPTR_    Y V L T F E D K D G D W M L V G D V P W D M F T D S C R R L R I M K G S E A I G L A P R A M E K C K N R N
pt011954_POPTR_    Y V L T Y E D K D G D W M L V G D V P W D M F T N S C R R L R I M K G S E A I G L A P R A M E K C K N R N
pt039771_POPTR_    Y V L T Y E D K D G D W M L V G D V P W E M F I E T C K R L R I M K S S D A I G L A P R A M E K C K N R N
 
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