fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G29080.1 NFKATELRLGLPGSES at 43/305 in AT4G29080.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm025343 NLKATELRLGLPGSES in 36/307 AT4G29080.1 1st_1st 0.522998296 Ia
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G29080.1     MSVSVAAEHDYIGLSEFPTMEATTMSDKTKTRDNNNGLNFKATELRLGLPGSESPER---
gm025343_Glyma0 MSVSLEQE-GYVGLSEVPAMEGC--SERT-----GGGLNLKATELRLGLPGSESPEREEG
                ****:  * .*:****.*:**.   *::*     ..***:*****************   

AT4G29080.1     -VDSRFLALNKSSCPVSGAKRVFSDAIN-DSNKWVFS--PGSTTATGDVGSGSGPR----
gm025343_Glyma0 VEDKNVHPLGMVKCLVSGAKRGFSDTIDGGSGKWLLSGNSGSEVGLGKDGGFFSPRGVGV
                  *... .*.  .* ****** ***:*: .*.**::*  .** .. *. *.  .**    

AT4G29080.1     -------------TSVVKDGKSTTFTKPAVPVKEKKSSATAPASKAQVVGWPPIRSFRKN
gm025343_Glyma0 SVSAAKAECTNQQTCVVKD----KVPQSPKPLNEKKPQISAPAAKEQVVGWPPIRSFRKN
                             *.****    ...:.. *::***.. :***:* **************

AT4G29080.1     SMASSQSQKPGNNSETEEAEAKSGPEQPCLYVKVSMEGAPYLRKIDLKTYKSYLELSSAL
gm025343_Glyma0 SMA-TQPQKNDDN-----AEAKS----VCLYVKVSMDGAPYLRKVDLKNFGTYMELSSAL
                *** :*.** .:*     *****     ********:*******:***.: :*:******

AT4G29080.1     EKMFSCFTIGQFGSHGGCGRDGLNESRLTDLLRGSEYVVTYEDKDSDWMLVGDVPWEMFI
gm025343_Glyma0 EKMFSCFTISQCGSHGVCGRDKLTENRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFT
                *********.* **** **** *.*.** ***:*****:******.************* 

AT4G29080.1     CSCKKLRIMKSSEAIGLAPRVMEKCRSRN
gm025343_Glyma0 DSCKRLRIMKSSEAIGLAPRAMEKCKSRN
                 ***:***************.****:***
BoxShade v3.31 C (beta, 970507) Output
AT4G29080.1     M S V S V A A E H D Y I G L S E F P T M E A T T M S D K T K T R D N N N G L N F K A T E L R L G L P G S E S P E R - - -
gm025343_Glyma0    M S V S L E Q E - G Y V G L S E V P A M E G C - - S E R T - - - - - G G G L N L K A T E L R L G L P G S E S P E R E E G
 
AT4G29080.1     - V D S R F L A L N K S S C P V S G A K R V F S D A I N - D S N K W V F S - - P G S T T A T G D V G S G S G P R - - - -
gm025343_Glyma0    V E D K N V H P L G M V K C L V S G A K R G F S D T I D G G S G K W L L S G N S G S E V G L G K D G G F F S P R G V G V
 
AT4G29080.1     - - - - - - - - - - - - - T S V V K D G K S T T F T K P A V P V K E K K S S A T A P A S K A Q V V G W P P I R S F R K N
gm025343_Glyma0    S V S A A K A E C T N Q Q T C V V K D - - - - K V P Q S P K P L N E K K P Q I S A P A A K E Q V V G W P P I R S F R K N
 
AT4G29080.1     S M A S S Q S Q K P G N N S E T E E A E A K S G P E Q P C L Y V K V S M E G A P Y L R K I D L K T Y K S Y L E L S S A L
gm025343_Glyma0    S M A - T Q P Q K N D D N - - - - - A E A K S - - - - V C L Y V K V S M D G A P Y L R K V D L K N F G T Y M E L S S A L
 
AT4G29080.1     E K M F S C F T I G Q F G S H G G C G R D G L N E S R L T D L L R G S E Y V V T Y E D K D S D W M L V G D V P W E M F I
gm025343_Glyma0    E K M F S C F T I S Q C G S H G V C G R D K L T E N R L M D L L H G S E Y V L T Y E D K D G D W M L V G D V P W E M F T
 
AT4G29080.1     C S C K K L R I M K S S E A I G L A P R V M E K C R S R N
gm025343_Glyma0    D S C K R L R I M K S S E A I G L A P R A M E K C K S R N
 
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