fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G29100.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm020122 not found in 347aa AT4G29100.1 1st_1st 0.476038338 Ia
Pt008340 not found in 350aa AT4G29100.1 1st_1st 0.472843450 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G29100.1     MNRGVLESSPVQQLMAAGNP-NWWNVSGGMRPPPPLMGHQQAPLPPHMTPNNNYLRPRMM
pt008340_POPTR_ MNRGVLQSSPVQQMM-AGNP-NWWSIN-NMRPPIT---HHQQPSP--------FLPP---
gm020122_Glyma0 MNRGVLQSSPVQQMM-ARNPNNWWNIN-TMRPP-P---PSQASAP--------FFST---
                ******:******:* * ** ***.:.  **** .     * . *        :: .   

AT4G29100.1     PTPFPHFLPSPATSSSSSSSSPSLPNNPNLSSW-LESNDLPPESWSLSQLLLGGLMMGEE
pt008340_POPTR_ PSLFPQFLP-----SISSSSSSSLP----LPSWNYDNPDQLPESW--SQLLLGG-LVCDE
gm020122_Glyma0 PSNF-----------LTPYNPTSLP----LPSW-HDNNQELPESW--SQLLMSG-MVSEE
                *: *            :. ...***    *.**  :. :  ****  ****:.* :: :*

AT4G29100.1     ERLEMMNHHNHHDEQQHHGFQGKIRLENWEEQVLSHQQASMVAVDIKQEGNINNNNGYVI
pt008340_POPTR_ DKSNISN------------FQAK-KMENWEEQVL-HQASSASVMDVKQENSASN---YVY
gm020122_Glyma0 EKGGMCQ------------IQSK-KLENWEQQML-SQAPSAPIVDVKQESSVNS---YVY
                ::  : :            :*.* ::****:*:*  * .*   :*:***.. ..   ** 

AT4G29100.1     ----------SS---------PNSPPNKSCVTTTTTTSLNSNDDNINNNNNMLDFSSNHN
pt008340_POPTR_ --GANEDFQAAAKPTACSQVIPASSP-KSCVTSFSS--------------NMLDFSTSK-
gm020122_Glyma0 GHGTNEEFQ-AAKPITWSQIVPASSP-KSCVTSFSS--------------SMLDFSNNN-
                          ::         * *.* *****: ::              .*****..: 

AT4G29100.1     GLHLSEGRHTPPDRSSECN-SLEIGGSTNKKPRLQPSPSSQSTLKVRKEKLGGRIAALHQ
pt008340_POPTR_ ----GDGRHPPPDRSSDCN-STANGGAV-KKARVQS-SSAQPTFKVRKEKLGDRITALHQ
gm020122_Glyma0 ----ADARPPPPDPSSECNSSTATGGAF-KKARVQP-PTTQSTFKVRKEKLGDRITALHQ
                    .:.* .*** **:** *   **:  **.*:*. .::*.*:********.**:****

AT4G29100.1     LVSPFGKTDTASVLSEAIGYIRFLQSQIEALSHPYFGTTASGNMRHQQHLQGDRSCIFPE
pt008340_POPTR_ LVSPFGKTDTASVLLEAIGYIRFLQSQIEALSLPYLG-SGSTNMRQQQSVQGESNCIFPE
gm020122_Glyma0 LVSPFGKTDTASVLLEAIGYIRFLQSQIEALSLPYLG-SGSGNMRHQQSVQGEKNCIFPE
                ************** ***************** **:* :.* ***:** :**: .*****

AT4G29100.1     DPGQLVNDQCMKRRGASSSSTDNQNASEEPKKDLRSRGLCLVPISCTLQVGSDNGADYWA
pt008340_POPTR_ DPGQLLNDSCIKRKGA-SQ----QDSHGEP-KDLRSRGLCLVPVSCTLQVGSDNGADYWA
gm020122_Glyma0 DPGQLLNENCLKRKAASSE----QDSQEEANKDLRSRGLCLVPVSCTLQVGSDNGADYWA
                *****:*:.*:**:.* *.    *::  *. ************:****************

AT4G29100.1     PALGSAGFH
pt008340_POPTR_ PALG-GGFR
gm020122_Glyma0 PAFG-GGFR
                **:* .**:
BoxShade v3.31 C (beta, 970507) Output
AT4G29100.1     M N R G V L E S S P V Q Q L M A A G N P - N W W N V S G G M R P P P P L M G H Q Q A P L P P H M T P N N N Y L R P R M M
pt008340_POPTR_    M N R G V L Q S S P V Q Q M M - A G N P - N W W S I N - N M R P P I T - - - H H Q Q P S P - - - - - - - - F L P P - - -
gm020122_Glyma0    M N R G V L Q S S P V Q Q M M - A R N P N N W W N I N - T M R P P - P - - - P S Q A S A P - - - - - - - - F F S T - - -
 
AT4G29100.1     P T P F P H F L P S P A T S S S S S S S S P S L P N N P N L S S W - L E S N D L P P E S W S L S Q L L L G G L M M G E E
pt008340_POPTR_    P S L F P Q F L P - - - - - S I S S S S S S S L P - - - - L P S W N Y D N P D Q L P E S W - - S Q L L L G G - L V C D E
gm020122_Glyma0    P S N F - - - - - - - - - - - L T P Y N P T S L P - - - - L P S W - H D N N Q E L P E S W - - S Q L L M S G - M V S E E
 
AT4G29100.1     E R L E M M N H H N H H D E Q Q H H G F Q G K I R L E N W E E Q V L S H Q Q A S M V A V D I K Q E G N I N N N N G Y V I
pt008340_POPTR_    D K S N I S N - - - - - - - - - - - - F Q A K - K M E N W E E Q V L - H Q A S S A S V M D V K Q E N S A S N - - - Y V Y
gm020122_Glyma0    E K G G M C Q - - - - - - - - - - - - I Q S K - K L E N W E Q Q M L - S Q A P S A P I V D V K Q E S S V N S - - - Y V Y
 
AT4G29100.1     - - - - - - - - - - S S - - - - - - - - - P N S P P N K S C V T T T T T T S L N S N D D N I N N N N N M L D F S S N H N
pt008340_POPTR_    - - G A N E D F Q A A A K P T A C S Q V I P A S S P - K S C V T S F S S - - - - - - - - - - - - - - N M L D F S T S K -
gm020122_Glyma0    G H G T N E E F Q - A A K P I T W S Q I V P A S S P - K S C V T S F S S - - - - - - - - - - - - - - S M L D F S N N N -
 
AT4G29100.1     G L H L S E G R H T P P D R S S E C N - S L E I G G S T N K K P R L Q P S P S S Q S T L K V R K E K L G G R I A A L H Q
pt008340_POPTR_    - - - - G D G R H P P P D R S S D C N - S T A N G G A V - K K A R V Q S - S S A Q P T F K V R K E K L G D R I T A L H Q
gm020122_Glyma0    - - - - A D A R P P P P D P S S E C N S S T A T G G A F - K K A R V Q P - P T T Q S T F K V R K E K L G D R I T A L H Q
 
AT4G29100.1     L V S P F G K T D T A S V L S E A I G Y I R F L Q S Q I E A L S H P Y F G T T A S G N M R H Q Q H L Q G D R S C I F P E
pt008340_POPTR_    L V S P F G K T D T A S V L L E A I G Y I R F L Q S Q I E A L S L P Y L G - S G S T N M R Q Q Q S V Q G E S N C I F P E
gm020122_Glyma0    L V S P F G K T D T A S V L L E A I G Y I R F L Q S Q I E A L S L P Y L G - S G S G N M R H Q Q S V Q G E K N C I F P E
 
AT4G29100.1     D P G Q L V N D Q C M K R R G A S S S S T D N Q N A S E E P K K D L R S R G L C L V P I S C T L Q V G S D N G A D Y W A
pt008340_POPTR_    D P G Q L L N D S C I K R K G A - S Q - - - - Q D S H G E P - K D L R S R G L C L V P V S C T L Q V G S D N G A D Y W A
gm020122_Glyma0    D P G Q L L N E N C L K R K A A S S E - - - - Q D S Q E E A N K D L R S R G L C L V P V S C T L Q V G S D N G A D Y W A
 
AT4G29100.1     P A L G S A G F H
pt008340_POPTR_    P A L G - G G F R
gm020122_Glyma0    P A F G - G G F R
 
0