fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G29100.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt008340 not found in 350aa AT4G29100.1 1st_1st 0.472843450 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G29100.1     MNRGVLESSPVQQLMAAGNPNWWNVSGGMRPPPPLMGHQQAPLPPHMTPNNNYLRPRMMP
pt008340_POPTR_ MNRGVLQSSPVQQMM-AGNPNWWSIN-NMRPP---ITHHQQPSP--------FLPP---P
                ******:******:* *******.:. .****   : *:* * *        :* *   *

AT4G29100.1     TPFPHFLPSPATSSSSSSSSPSLPNNPNLSSWLESN-DLPPESWSLSQLLLGGLMMGEEE
pt008340_POPTR_ SLFPQFLPS--ISSSSSSSLP-------LPSWNYDNPDQLPESW--SQLLLGGLVCDE--
                : **:****   ******* *       *.**  .* *  ****  ********: .*  

AT4G29100.1     RLEMMNHHNHHDEQQHHGFQGKIRLENWEEQVLSHQQASMVAVDIKQEGNINNNNGYVIS
pt008340_POPTR_ -----------DKSNISNFQAK-KMENWEEQVL-HQASSASVMDVKQENSASN---YVYG
                           *:.:  .**.* ::******** ** :*  .:*:***.. .*   ** .

AT4G29100.1     S-----------------PNSPPNKSCVTTTTTTSLNSNDDNINNNNNMLDFSSNHNGLH
pt008340_POPTR_ ANEDFQAAAKPTACSQVIPASSP-KSCVTSFSS--------------NMLDFSTSK----
                :                 * *.* *****: ::              ******:.:    

AT4G29100.1     LSEGRHTPPDRSSECNSLEIGGSTNKKPRLQPSPSSQSTLKVRKEKLGGRIAALHQLVSP
pt008340_POPTR_ -GDGRHPPPDRSSDCNSTANGGAV-KKARVQ-SSSAQPTFKVRKEKLGDRITALHQLVSP
                 .:***.******:***   **:. **.*:* *.*:*.*:********.**:********

AT4G29100.1     FGKTDTASVLSEAIGYIRFLQSQIEALSHPYFGTTASGNMRHQQHLQGDRSCIFPEDPGQ
pt008340_POPTR_ FGKTDTASVLLEAIGYIRFLQSQIEALSLPYLG-SGSTNMRQQQSVQGESNCIFPEDPGQ
                ********** ***************** **:* :.* ***:** :**: .*********

AT4G29100.1     LVNDQCMKRRGASSSSTDNQNASEEPKKDLRSRGLCLVPISCTLQVGSDNGADYWAPALG
pt008340_POPTR_ LLNDSCIKRKGAS-----QQDSHGEP-KDLRSRGLCLVPVSCTLQVGSDNGADYWAPALG
                *:**.*:**:***     :*::  ** ************:********************

AT4G29100.1     SAGFH
pt008340_POPTR_ -GGFR
                 .**:
BoxShade v3.31 C (beta, 970507) Output
AT4G29100.1     M N R G V L E S S P V Q Q L M A A G N P N W W N V S G G M R P P P P L M G H Q Q A P L P P H M T P N N N Y L R P R M M P
pt008340_POPTR_    M N R G V L Q S S P V Q Q M M - A G N P N W W S I N - N M R P P - - - I T H H Q Q P S P - - - - - - - - F L P P - - - P
 
AT4G29100.1     T P F P H F L P S P A T S S S S S S S S P S L P N N P N L S S W L E S N - D L P P E S W S L S Q L L L G G L M M G E E E
pt008340_POPTR_    S L F P Q F L P S - - I S S S S S S S L P - - - - - - - L P S W N Y D N P D Q L P E S W - - S Q L L L G G L V C D E - -
 
AT4G29100.1     R L E M M N H H N H H D E Q Q H H G F Q G K I R L E N W E E Q V L S H Q Q A S M V A V D I K Q E G N I N N N N G Y V I S
pt008340_POPTR_    - - - - - - - - - - - D K S N I S N F Q A K - K M E N W E E Q V L - H Q A S S A S V M D V K Q E N S A S N - - - Y V Y G
 
AT4G29100.1     S - - - - - - - - - - - - - - - - - P N S P P N K S C V T T T T T T S L N S N D D N I N N N N N M L D F S S N H N G L H
pt008340_POPTR_    A N E D F Q A A A K P T A C S Q V I P A S S P - K S C V T S F S S - - - - - - - - - - - - - - N M L D F S T S K - - - -
 
AT4G29100.1     L S E G R H T P P D R S S E C N S L E I G G S T N K K P R L Q P S P S S Q S T L K V R K E K L G G R I A A L H Q L V S P
pt008340_POPTR_    - G D G R H P P P D R S S D C N S T A N G G A V - K K A R V Q - S S S A Q P T F K V R K E K L G D R I T A L H Q L V S P
 
AT4G29100.1     F G K T D T A S V L S E A I G Y I R F L Q S Q I E A L S H P Y F G T T A S G N M R H Q Q H L Q G D R S C I F P E D P G Q
pt008340_POPTR_    F G K T D T A S V L L E A I G Y I R F L Q S Q I E A L S L P Y L G - S G S T N M R Q Q Q S V Q G E S N C I F P E D P G Q
 
AT4G29100.1     L V N D Q C M K R R G A S S S S T D N Q N A S E E P K K D L R S R G L C L V P I S C T L Q V G S D N G A D Y W A P A L G
pt008340_POPTR_    L L N D S C I K R K G A S - - - - - Q Q D S H G E P - K D L R S R G L C L V P V S C T L Q V G S D N G A D Y W A P A L G
 
AT4G29100.1     S A G F H
pt008340_POPTR_    - G G F R
 
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