fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G29100.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm020122 not found in 347aa AT4G29100.1 1st_1st 0.476038338 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G29100.1     MNRGVLESSPVQQLMAAGNPNWWNVSGGMRPPPPLMGHQQAPLPPHMTPNNNYLRPRMMP
gm020122_Glyma0 MNRGVLQSSPVQQMMARNPNNWWNIN-TMRPPPP----SQASAPFFSTP-SNFLTP-YNP
                ******:******:** .  ****:.  ******    .**. * . ** .*:* *   *

AT4G29100.1     TPFPHFLPSPATSSSSSSSSPSLPNNPNLSSWLESNDLPPESWSLSQLLLGGLMMGEEER
gm020122_Glyma0 TSLP------------------------LPSWHDNNQELPESW--SQLLMSG-MVSEEEK
                *.:*                        *.** :.*:  ****  ****:.* *:.***:

AT4G29100.1     LEMMNHHNHHDEQQHHGFQGKIRLENWEEQVLSHQQASMVAVDIKQEGNINN-------N
gm020122_Glyma0 GGMCQ------------IQSK-KLENWEQQMLS-QAPSAPIVDVKQESSVNSYVYGHGTN
                  * :            :*.* :*****:*:** * .*   **:***..:*.       *

AT4G29100.1     NGYVISSP---------NSPPNKSCVTTTTTTSLNSNDDNINNNNNMLDFSSNHNGLHLS
gm020122_Glyma0 EEFQAAKPITWSQIVPASSP--KSCVTSFSSS--------------MLDFSNNN-----A
                : :  :.*         .**  *****: :::              *****.*:     :

AT4G29100.1     EGRHTPPDRSSECNSLEIGGSTNKKPRLQPSPSSQSTLKVRKEKLGGRIAALHQLVSPFG
gm020122_Glyma0 DARPPPPDPSSECNSSTATGGAFKKARVQP-PTTQSTFKVRKEKLGDRITALHQLVSPFG
                :.* .*** ******    *.: **.*:** *::***:********.**:**********

AT4G29100.1     KTDTASVLSEAIGYIRFLQSQIEALSHPYFGTTASGNMRHQQHLQGDRSCIFPEDPGQLV
gm020122_Glyma0 KTDTASVLLEAIGYIRFLQSQIEALSLPYLG-SGSGNMRHQQSVQGEKNCIFPEDPGQLL
                ******** ***************** **:* :.******** :**::.**********:

AT4G29100.1     NDQCMKRRGASSSSTDNQNASEEPKKDLRSRGLCLVPISCTLQVGSDNGADYWAPALGSA
gm020122_Glyma0 NENCLKRKAASSE----QDSQEEANKDLRSRGLCLVPVSCTLQVGSDNGADYWAPAFG-G
                *::*:**:.***.    *::.**.:************:******************:* .

AT4G29100.1     GFH
gm020122_Glyma0 GFR
                **:
BoxShade v3.31 C (beta, 970507) Output
AT4G29100.1     M N R G V L E S S P V Q Q L M A A G N P N W W N V S G G M R P P P P L M G H Q Q A P L P P H M T P N N N Y L R P R M M P
gm020122_Glyma0    M N R G V L Q S S P V Q Q M M A R N P N N W W N I N - T M R P P P P - - - - S Q A S A P F F S T P - S N F L T P - Y N P
 
AT4G29100.1     T P F P H F L P S P A T S S S S S S S S P S L P N N P N L S S W L E S N D L P P E S W S L S Q L L L G G L M M G E E E R
gm020122_Glyma0    T S L P - - - - - - - - - - - - - - - - - - - - - - - - L P S W H D N N Q E L P E S W - - S Q L L M S G - M V S E E E K
 
AT4G29100.1     L E M M N H H N H H D E Q Q H H G F Q G K I R L E N W E E Q V L S H Q Q A S M V A V D I K Q E G N I N N - - - - - - - N
gm020122_Glyma0    G G M C Q - - - - - - - - - - - - I Q S K - K L E N W E Q Q M L S - Q A P S A P I V D V K Q E S S V N S Y V Y G H G T N
 
AT4G29100.1     N G Y V I S S P - - - - - - - - - N S P P N K S C V T T T T T T S L N S N D D N I N N N N N M L D F S S N H N G L H L S
gm020122_Glyma0    E E F Q A A K P I T W S Q I V P A S S P - - K S C V T S F S S S - - - - - - - - - - - - - - M L D F S N N N - - - - - A
 
AT4G29100.1     E G R H T P P D R S S E C N S L E I G G S T N K K P R L Q P S P S S Q S T L K V R K E K L G G R I A A L H Q L V S P F G
gm020122_Glyma0    D A R P P P P D P S S E C N S S T A T G G A F K K A R V Q P - P T T Q S T F K V R K E K L G D R I T A L H Q L V S P F G
 
AT4G29100.1     K T D T A S V L S E A I G Y I R F L Q S Q I E A L S H P Y F G T T A S G N M R H Q Q H L Q G D R S C I F P E D P G Q L V
gm020122_Glyma0    K T D T A S V L L E A I G Y I R F L Q S Q I E A L S L P Y L G - S G S G N M R H Q Q S V Q G E K N C I F P E D P G Q L L
 
AT4G29100.1     N D Q C M K R R G A S S S S T D N Q N A S E E P K K D L R S R G L C L V P I S C T L Q V G S D N G A D Y W A P A L G S A
gm020122_Glyma0    N E N C L K R K A A S S E - - - - Q D S Q E E A N K D L R S R G L C L V P V S C T L Q V G S D N G A D Y W A P A F G - G
 
AT4G29100.1     G F H
gm020122_Glyma0    G F R
 
0