fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G29230.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sm011004 not found in 171aa AT4G29230.1 1st_1st 0.302243211 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G29230.1     MNKSNPAGSVTGSDIIDAKIEEHQLCGSKKCPSCGHKLEGKPQDWVGLPAGVKFDPTDQE
Sm011004_Selmo1 --------------------------------------SQAPQDWTGLPAGVKFDPNDKE
                                                      .  ****.**********.*:*

AT4G29230.1     LIEHLEAKVLAKDFKSHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKA
Sm011004_Selmo1 ILDHLAAKI-GRGGKPHALIDEFIPTLEDDEGICSKHPEKLPGVKSDGSSSHFFHRPSNA
                :::** **: .:. *.*.********:*.::*** .********. ** * *******:*

AT4G29230.1     YTTGTRKRRKIQTECDNNLQGSSSSGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGK
Sm011004_Selmo1 YTKGTRKRRKVQTDDDD---------ETRWHKTGKTRPVMENGEVIGWKKIMVLYTNFKK
                **.*******:**: *:         ************** **:  * ***:****** *

AT4G29230.1     NRKPEKTNWVMHQYHLGTHEEEKEGELVVSKIFYQTQPRQCNWSSSTSSLNAIGGGGGEA
Sm011004_Selmo1 KSKPKKTNWVIHQYHVGIHEDEREGELVMSKVFFQTQPR---------------------
                : **:*****:****:* **:*:*****:**:*:*****                     

AT4G29230.1     SSGGGGGEYHMRRDSGTTSGGSCSSSREIINVNPPNRSDEIGGVGGGVMAVAAAAAAVAA
Sm011004_Selmo1 ------------------------------------------------------------
                                                                            

AT4G29230.1     GLPSYAMDQLSFVPFMKSFDEVARRETPQTGHATCEDVMAEQHRHRHQPSSSTSHHMAHD
Sm011004_Selmo1 ------------------------------------------------------------
                                                                            

AT4G29230.1     HHHHHHQQQQQRHHAFNISQPTHPISTIISPSTSLHHASINILDDNPYHVHRILLPNENY
Sm011004_Selmo1 ------------------------------------------------------------
                                                                            

AT4G29230.1     QTQQQLRQEGEEEHNDGKMGGRSASGLEELIMGCTSSTTHHDVKDGSSSMGNQQEAEWLK
Sm011004_Selmo1 ------------------------------------------------------------
                                                                            

AT4G29230.1     YSTFWPAPDSSDNQDHHG
Sm011004_Selmo1 ------------------
BoxShade v3.31 C (beta, 970507) Output
AT4G29230.1     M N K S N P A G S V T G S D I I D A K I E E H Q L C G S K K C P S C G H K L E G K P Q D W V G L P A G V K F D P T D Q E
Sm011004_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - S Q A P Q D W T G L P A G V K F D P N D K E
 
AT4G29230.1     L I E H L E A K V L A K D F K S H P L I D E F I P T I E G E D G I C Y T H P E K L P G V T R D G L S R H F F H R P S K A
Sm011004_Selmo1    I L D H L A A K I - G R G G K P H A L I D E F I P T L E D D E G I C S K H P E K L P G V K S D G S S S H F F H R P S N A
 
AT4G29230.1     Y T T G T R K R R K I Q T E C D N N L Q G S S S S G E T R W H K T G K T R P V M V N G K Q K G C K K I L V L Y T N F G K
Sm011004_Selmo1    Y T K G T R K R R K V Q T D D D D - - - - - - - - - E T R W H K T G K T R P V M E N G E V I G W K K I M V L Y T N F K K
 
AT4G29230.1     N R K P E K T N W V M H Q Y H L G T H E E E K E G E L V V S K I F Y Q T Q P R Q C N W S S S T S S L N A I G G G G G E A
Sm011004_Selmo1    K S K P K K T N W V I H Q Y H V G I H E D E R E G E L V M S K V F F Q T Q P R - - - - - - - - - - - - - - - - - - - - -
 
AT4G29230.1     S S G G G G G E Y H M R R D S G T T S G G S C S S S R E I I N V N P P N R S D E I G G V G G G V M A V A A A A A A V A A
Sm011004_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT4G29230.1     G L P S Y A M D Q L S F V P F M K S F D E V A R R E T P Q T G H A T C E D V M A E Q H R H R H Q P S S S T S H H M A H D
Sm011004_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT4G29230.1     H H H H H H Q Q Q Q Q R H H A F N I S Q P T H P I S T I I S P S T S L H H A S I N I L D D N P Y H V H R I L L P N E N Y
Sm011004_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT4G29230.1     Q T Q Q Q L R Q E G E E E H N D G K M G G R S A S G L E E L I M G C T S S T T H H D V K D G S S S M G N Q Q E A E W L K
Sm011004_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT4G29230.1     Y S T F W P A P D S S D N Q D H H G
Sm011004_Selmo1    - - - - - - - - - - - - - - - - - -
 
0