fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G29230.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb003892 not found in 480aa AT4G29230.1 not_1st 0.404958677 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G29230.1     MNKSNPAGSVTGSD-----IIDAKIEEH--QLCGSKKCPSCGHKLEGKPQDWVGLPAGVK
Sb003892_Sorbi1 MDGAAAAAAATGSGGGGHRRMDSRIEEHGKYLSESSCCSQCGHKTERK-LDWVGLPAGVK
                *: : .*.:.***.      :*::****   *. *. *..**** * *  **********

AT4G29230.1     FDPTDQELIEHLEAKVLAKDFK--SHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSR
Sb003892_Sorbi1 FDPTDQELIEHLQAKVRAASAAAPSHPLIDEFIPTIEGEDGICYTHPERLPGLTKDGRSR
                ************:*** * .    ************************:***:*:** **

AT4G29230.1     HFFHRPSKAYTTGTRKRRKIQTECDNNLQGSSSSG------------ETRWHKTGKTRPV
Sb003892_Sorbi1 HFFHRPSKAYTTGTRKRRKIQPRA---AESSSSSALPAQQQQQQQRSETRWHKTGKTRPV
                *********************...    :.****.            *************

AT4G29230.1     MVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGTHEEEKEGELVVSKIFYQTQPR
Sb003892_Sorbi1 VVAGQQRGCKKILVLYTNFGKHRKPDKTNWVMHQYHLGDKEEEREGELVVSKIFYQTQPR
                :* *:*:**************:***:************ :***:****************

AT4G29230.1     QCNWSSSTSSLNAIGGGGGEASSGGGGGEYHMRRDSGTTSGGSCSSSREIINVNPPNRSD
Sb003892_Sorbi1 QCGVAAEPA-----------------------------VAAAASSDTVEEAAADPPLPPD
                **. ::..:                             .:..:.*.: *   .:**  .*

AT4G29230.1     EIGGVGGGVMAVAAAAAAV--AAGLPSYAMDQLSFVPFMKSFDEVARRETPQTGHATCE-
Sb003892_Sorbi1 ------GMVVPPPDVAGAFHGAAGI-----DEFNFAQFRSSFEEV------DVGASSVQI
                      * *:. . .*.*.  ***:     *::.*. * .**:**      :.* :: : 

AT4G29230.1     DVMAEQHRHRHQPSSSTSHHMAHDHHHHHHQQQQQRHH------AFNISQPTHPISTIIS
Sb003892_Sorbi1 SVRDDEEVHAGHPNL----HQEHNLHQHQFGNQEQRQRMAAAAAAFHINTPTEPITTMIT
                .*  ::. *  :*.     *  *: *:*:. :*:**::      **:*. **.**:*:*:

AT4G29230.1     PSTSLHHASINILDDNPY---HVHRILLPNENYQTQQQLRQEGEEEHNDGKMGGRSASGL
Sb003892_Sorbi1 SSTVVHHGSAVLQHPDAYGHGTTYR-----RHQQDDEQLHQQPQS------FDGRSTAGL
                .** :**.*  : . :.*    .:*     .: * ::**:*: :.      :.***::**

AT4G29230.1     EELIMGCTSSTTHHD-------------------VKDGSSSMGNQQEAEWLKYSTFWPAP
Sb003892_Sorbi1 EAVIMGCTSSRRSKRGKKLNLPYNIYSYFYVFFCIQEASGSGGNKESTGW-PYQSFWP--
                * :*******   :                    :::.*.* **::.: *  *.:***  

AT4G29230.1     DSSDNQDHHG
Sb003892_Sorbi1 --SDSQDHHG
                  **.*****
BoxShade v3.31 C (beta, 970507) Output
AT4G29230.1     M N K S N P A G S V T G S D - - - - - I I D A K I E E H - - Q L C G S K K C P S C G H K L E G K P Q D W V G L P A G V K
Sb003892_Sorbi1    M D G A A A A A A A T G S G G G G H R R M D S R I E E H G K Y L S E S S C C S Q C G H K T E R K - L D W V G L P A G V K
 
AT4G29230.1     F D P T D Q E L I E H L E A K V L A K D F K - - S H P L I D E F I P T I E G E D G I C Y T H P E K L P G V T R D G L S R
Sb003892_Sorbi1    F D P T D Q E L I E H L Q A K V R A A S A A A P S H P L I D E F I P T I E G E D G I C Y T H P E R L P G L T K D G R S R
 
AT4G29230.1     H F F H R P S K A Y T T G T R K R R K I Q T E C D N N L Q G S S S S G - - - - - - - - - - - - E T R W H K T G K T R P V
Sb003892_Sorbi1    H F F H R P S K A Y T T G T R K R R K I Q P R A - - - A E S S S S S A L P A Q Q Q Q Q Q Q R S E T R W H K T G K T R P V
 
AT4G29230.1     M V N G K Q K G C K K I L V L Y T N F G K N R K P E K T N W V M H Q Y H L G T H E E E K E G E L V V S K I F Y Q T Q P R
Sb003892_Sorbi1    V V A G Q Q R G C K K I L V L Y T N F G K H R K P D K T N W V M H Q Y H L G D K E E E R E G E L V V S K I F Y Q T Q P R
 
AT4G29230.1     Q C N W S S S T S S L N A I G G G G G E A S S G G G G G E Y H M R R D S G T T S G G S C S S S R E I I N V N P P N R S D
Sb003892_Sorbi1    Q C G V A A E P A - - - - - - - - - - - - - - - - - - - - - - - - - - - - - V A A A A S S D T V E E A A A D P P L P P D
 
AT4G29230.1     E I G G V G G G V M A V A A A A A A V - - A A G L P S Y A M D Q L S F V P F M K S F D E V A R R E T P Q T G H A T C E -
Sb003892_Sorbi1    - - - - - - G M V V P P P D V A G A F H G A A G I - - - - - D E F N F A Q F R S S F E E V - - - - - - D V G A S S V Q I
 
AT4G29230.1     D V M A E Q H R H R H Q P S S S T S H H M A H D H H H H H H Q Q Q Q Q R H H - - - - - - A F N I S Q P T H P I S T I I S
Sb003892_Sorbi1    S V R D D E E V H A G H P N L - - - - H Q E H N L H Q H Q F G N Q E Q R Q R M A A A A A A F H I N T P T E P I T T M I T
 
AT4G29230.1     P S T S L H H A S I N I L D D N P Y - - - H V H R I L L P N E N Y Q T Q Q Q L R Q E G E E E H N D G K M G G R S A S G L
Sb003892_Sorbi1    S S T V V H H G S A V L Q H P D A Y G H G T T Y R - - - - - R H Q Q D D E Q L H Q Q P Q S - - - - - - F D G R S T A G L
 
AT4G29230.1     E E L I M G C T S S T T H H D - - - - - - - - - - - - - - - - - - - V K D G S S S M G N Q Q E A E W L K Y S T F W P A P
Sb003892_Sorbi1    E A V I M G C T S S R R S K R G K K L N L P Y N I Y S Y F Y V F F C I Q E A S G S G G N K E S T G W - P Y Q S F W P - -
 
AT4G29230.1     D S S D N Q D H H G
Sb003892_Sorbi1    - - S D S Q D H H G
 
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