fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G29230.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb024600 not found in 632aa AT4G29230.1 1st_1st 0.489964580 Ia
Sb003892 not found in 480aa AT4G29230.1 not_1st 0.404958677 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G29230.1     ------------MNKSNPA----------------------GSVTGS-----DIIDAKIE
Sb024600_Sorbi1 LLLRLALRAARRRNKNHPSPITTTHACALPPGAAYEPDMNRGHSSSS-----KLINEKLE
Sb003892_Sorbi1 ------------MDGAAAA----------------------AAATGSGGGGHRRMDSRIE
                             :   .:                      .  :.*       :: ::*

AT4G29230.1     EH--QLCGSKKCPSCGHKLEGKPQDWVGLPAGVKFDPTDQELIEHLEAKVLAKDFK--SH
Sb024600_Sorbi1 EH--RISTAKHCPHCGEKIDSKP-DWVGLPAGVKFDPTDQELIEHLEAKVKDEGSR--SH
Sb003892_Sorbi1 EHGKYLSESSCCSQCGHKTERKL-DWVGLPAGVKFDPTDQELIEHLQAKVRAASAAAPSH
                **   :. :. *. **.* : *  **********************:***   .    **

AT4G29230.1     PLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQTECDN
Sb024600_Sorbi1 PLIDEFIPTIDGEDGICYTHPEKLPGVTRDGLSKHFFHRPSKAYTTGTRKRRKIQTECDV
Sb003892_Sorbi1 PLIDEFIPTIEGEDGICYTHPERLPGLTKDGRSRHFFHRPSKAYTTGTRKRRKIQPRAAE
                **********:***********:***:*:** *:*********************...  

AT4G29230.1     NLQGSS---------SSGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTN
Sb024600_Sorbi1 H---------------KGETRWHKTGKTRPVMVNGRQKGCKKILVLYTNFGKHRKPEKTN
Sb003892_Sorbi1 SSSSSALPAQQQQQQQRSETRWHKTGKTRPVVVAGQQRGCKKILVLYTNFGKHRKPDKTN
                                 .*************:* *:*:**************:***:***

AT4G29230.1     WVMHQYHLGTHEEEKEGELVVSKIFYQTQPRQCNWSSS--TSSLNAIGGGGGEASSGGGG
Sb024600_Sorbi1 WVMHQYHLGDLEEEKEGELVVCKIFYQTQPRQCSWSSDRGTAATAAM------AATTMAA
Sb003892_Sorbi1 WVMHQYHLGDKEEEREGELVVSKIFYQTQPRQC------GVAAEPAVA-----AAASSDT
                *********  ***:******.***********       .::  *:      *::    

AT4G29230.1     GEYHMRRDSGTTSGGSCSSSREIINVNPPNRSDEIGGVG--GGVMAVAAAAAAVAAGLPS
Sb024600_Sorbi1 QEQH-RRDSGS---GSCSS-----------RDHEVSATSFPAGYTVTTAVEMQQHMKQPA
Sb003892_Sorbi1 VEEA-AADPPLPPDGMVVP--------PP---DVAGAFHGAAGI----------------
                 *     *.     *   .             .  ..    .*                 

AT4G29230.1     YAMDQLSFVPFMKSFDEVARRETPQTGHATCEDVMAEQHRHRHQPSSSTSHHMAHDHHHH
Sb024600_Sorbi1 ---DHFSFAPFRKTFDQ----EVGIGG-----DQVPSNQLGRSEP--------------H
Sb003892_Sorbi1 ---DEFNFAQFRSSFEEV---DVGASSVQI--SVRDDEEVHAGHP----NLHQEHNLHQH
                   *.:.*. * .:*::    :.   .     .   .:.    .*              *

AT4G29230.1     HHQQQQQRH------------HAFNISQPTHPISTIISPSTSLHHASINILDDNPYHVHR
Sb024600_Sorbi1 HAGQGQQPHGPVLSTTTAVPATAFLISRPSNPVSTIVPP--EMQHASV-VLDHDQFHVPA
Sb003892_Sorbi1 QFGNQEQRQ------RMAAAAAAFHINTPTEPITTMITSSTVVHHGSA-VLQHPDAYGHG
                :  : :* :             ** *. *:.*::*::..   ::*.*  :*:.   :   

AT4G29230.1     ILL-PNENYQTQQQLRQEGEEEHNDGKMGGRSASGLEELIMGCTSSTTHHD---------
Sb024600_Sorbi1 ILLHHHDKFQPQHQQHQPQQ------KLDRRSA-GLEELIMGCTSSTS------------
Sb003892_Sorbi1 TTYRRHQ--QDDEQLHQQPQ------SFDGRSTAGLEAVIMGCTSSRRSKRGKKLNLPYN
                     ::  * :.* :*  :      .:. **: *** :*******              

AT4G29230.1     ----------VKDGSSSMGNQQEAEWLKYSTFWPAPDSSDNQDHHG
Sb024600_Sorbi1 -----------TKGETSIAHPQETEW-PYP-YWP----PDNQDHHG
Sb003892_Sorbi1 IYSYFYVFFCIQEASGSGGNKESTGW-PYQSFWP----SDSQDHHG
                            ... * .: :.: *  *  :**    .*.*****
BoxShade v3.31 C (beta, 970507) Output
AT4G29230.1     - - - - - - - - - - - - M N K S N P A - - - - - - - - - - - - - - - - - - - - - - G S V T G S - - - - - D I I D A K I E
Sb024600_Sorbi1    L L L R L A L R A A R R R N K N H P S P I T T T H A C A L P P G A A Y E P D M N R G H S S S S - - - - - K L I N E K L E
Sb003892_Sorbi1    - - - - - - - - - - - - M D G A A A A - - - - - - - - - - - - - - - - - - - - - - A A A T G S G G G G H R R M D S R I E
 
AT4G29230.1     E H - - Q L C G S K K C P S C G H K L E G K P Q D W V G L P A G V K F D P T D Q E L I E H L E A K V L A K D F K - - S H
Sb024600_Sorbi1    E H - - R I S T A K H C P H C G E K I D S K P - D W V G L P A G V K F D P T D Q E L I E H L E A K V K D E G S R - - S H
Sb003892_Sorbi1    E H G K Y L S E S S C C S Q C G H K T E R K L - D W V G L P A G V K F D P T D Q E L I E H L Q A K V R A A S A A A P S H
 
AT4G29230.1     P L I D E F I P T I E G E D G I C Y T H P E K L P G V T R D G L S R H F F H R P S K A Y T T G T R K R R K I Q T E C D N
Sb024600_Sorbi1    P L I D E F I P T I D G E D G I C Y T H P E K L P G V T R D G L S K H F F H R P S K A Y T T G T R K R R K I Q T E C D V
Sb003892_Sorbi1    P L I D E F I P T I E G E D G I C Y T H P E R L P G L T K D G R S R H F F H R P S K A Y T T G T R K R R K I Q P R A A E
 
AT4G29230.1     N L Q G S S - - - - - - - - - S S G E T R W H K T G K T R P V M V N G K Q K G C K K I L V L Y T N F G K N R K P E K T N
Sb024600_Sorbi1    H - - - - - - - - - - - - - - - K G E T R W H K T G K T R P V M V N G R Q K G C K K I L V L Y T N F G K H R K P E K T N
Sb003892_Sorbi1    S S S S S A L P A Q Q Q Q Q Q Q R S E T R W H K T G K T R P V V V A G Q Q R G C K K I L V L Y T N F G K H R K P D K T N
 
AT4G29230.1     W V M H Q Y H L G T H E E E K E G E L V V S K I F Y Q T Q P R Q C N W S S S - - T S S L N A I G G G G G E A S S G G G G
Sb024600_Sorbi1    W V M H Q Y H L G D L E E E K E G E L V V C K I F Y Q T Q P R Q C S W S S D R G T A A T A A M - - - - - - A A T T M A A
Sb003892_Sorbi1    W V M H Q Y H L G D K E E E R E G E L V V S K I F Y Q T Q P R Q C - - - - - - G V A A E P A V A - - - - - A A A S S D T
 
AT4G29230.1     G E Y H M R R D S G T T S G G S C S S S R E I I N V N P P N R S D E I G G V G - - G G V M A V A A A A A A V A A G L P S
Sb024600_Sorbi1    Q E Q H - R R D S G S - - - G S C S S - - - - - - - - - - - R D H E V S A T S F P A G Y T V T T A V E M Q Q H M K Q P A
Sb003892_Sorbi1    V E E A - A A D P P L P P D G M V V P - - - - - - - - P P - - - D V A G A F H G A A G I - - - - - - - - - - - - - - - -
 
AT4G29230.1     Y A M D Q L S F V P F M K S F D E V A R R E T P Q T G H A T C E D V M A E Q H R H R H Q P S S S T S H H M A H D H H H H
Sb024600_Sorbi1    - - - D H F S F A P F R K T F D Q - - - - E V G I G G - - - - - D Q V P S N Q L G R S E P - - - - - - - - - - - - - - H
Sb003892_Sorbi1    - - - D E F N F A Q F R S S F E E V - - - D V G A S S V Q I - - S V R D D E E V H A G H P - - - - N L H Q E H N L H Q H
 
AT4G29230.1     H H Q Q Q Q Q R H - - - - - - - - - - - - H A F N I S Q P T H P I S T I I S P S T S L H H A S I N I L D D N P Y H V H R
Sb024600_Sorbi1    H A G Q G Q Q P H G P V L S T T T A V P A T A F L I S R P S N P V S T I V P P - - E M Q H A S V - V L D H D Q F H V P A
Sb003892_Sorbi1    Q F G N Q E Q R Q - - - - - - R M A A A A A A F H I N T P T E P I T T M I T S S T V V H H G S A - V L Q H P D A Y G H G
 
AT4G29230.1     I L L - P N E N Y Q T Q Q Q L R Q E G E E E H N D G K M G G R S A S G L E E L I M G C T S S T T H H D - - - - - - - - -
Sb024600_Sorbi1    I L L H H H D K F Q P Q H Q Q H Q P Q Q - - - - - - K L D R R S A - G L E E L I M G C T S S T S - - - - - - - - - - - -
Sb003892_Sorbi1    T T Y R R H Q - - Q D D E Q L H Q Q P Q - - - - - - S F D G R S T A G L E A V I M G C T S S R R S K R G K K L N L P Y N
 
AT4G29230.1     - - - - - - - - - - V K D G S S S M G N Q Q E A E W L K Y S T F W P A P D S S D N Q D H H G
Sb024600_Sorbi1    - - - - - - - - - - - T K G E T S I A H P Q E T E W - P Y P - Y W P - - - - P D N Q D H H G
Sb003892_Sorbi1    I Y S Y F Y V F F C I Q E A S G S G G N K E S T G W - P Y Q S F W P - - - - S D S Q D H H G
 
1