fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G29930.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm024206 not found in 244aa AT5G57150.1 1st_not 0.463133640 II
Pt009252 not found in 249aa AT5G57150.1 1st_not 0.453917050 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G29930.1     ---MEDLDHEYKNYWETTMFFQNQELEFDSWPMEEAFSGSGESSSPDGAATSPASSKNVV
gm024206_Glyma0 ---MENIGEEYKHYWETNMFLQTQEL--DSWGLDEALSGYYDSSSPDGAASS-AASKNIV
pt009252_POPTR_ MEPIENIGEEYQNYWETKMFLQNEEL--DSWAIDEAFSGYYDSSSPDGAASS-AATKNIV
                   :*::..**::****.**:*.:**  *** ::**:**  :********:* *::**:*

AT4G29930.1     SERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRELESRS
gm024206_Glyma0 SERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIEYIQHLHEQEKIIQAEIMELESGM
pt009252_POPTR_ SERNRRKKLNERLFALRAVVPNISKMDKASIIKDAIDYIQELHDQEKQIQAELSELESGK
                ******:***:******:*******:****:***:*:*:*.* :*** ::**: ****  

AT4G29930.1     TLLENPVRDYDCNFAETHLQDFSDNNDMRSKKFK---QMDYSTRVQHYPIEVLEMKVTWM
gm024206_Glyma0 P------RKSP-SYG-FEQEQLP--VVLRSKKKRTE-QLYDSVTSRNTPIEVLELRVTYM
pt009252_POPTR_ S------KKNQGGFGVYYHQELP--VLLRSKKKKIDYQFCDFGGSKISPIELLELRVAYM
                .      :.   .:.    :::.    :**** :   *:      :  ***:**::*::*

AT4G29930.1     GEKTVVVCITCSKKRETMVQLCKVLESLNLNILTTNFSSFTSRLSTTLFLQADEEESSAV
gm024206_Glyma0 GEKTVVVSLTCSKRTDTMVKLCEVFESLKLKIITANITSFSGRLLKTVFIEANEEEKDHL
pt009252_POPTR_ GENTLLVSLTCNKRTDTMVKLCEVFESLGLKIITANITTVSGRVLKTVFIEADEEEKDKL
                **:*::*.:**.*: :***:**:*:*** *:*:*:*:::.:.*: .*:*::*:***.. :

AT4G29930.1     EAKIQMAIAAY-NDPNCLINF
gm024206_Glyma0 QIKIQTAIKALNNDPLSPMSI
pt009252_POPTR_ KIRIEAAIAAL-NDPPSPMSM
                : :*: ** *  *** . :.:
BoxShade v3.31 C (beta, 970507) Output
AT4G29930.1     - - - M E D L D H E Y K N Y W E T T M F F Q N Q E L E F D S W P M E E A F S G S G E S S S P D G A A T S P A S S K N V V
gm024206_Glyma0    - - - M E N I G E E Y K H Y W E T N M F L Q T Q E L - - D S W G L D E A L S G Y Y D S S S P D G A A S S - A A S K N I V
pt009252_POPTR_    M E P I E N I G E E Y Q N Y W E T K M F L Q N E E L - - D S W A I D E A F S G Y Y D S S S P D G A A S S - A A T K N I V
 
AT4G29930.1     S E R N R R Q K L N Q R L F A L R S V V P N I S K L D K A S V I K D S I D Y M Q E L I D Q E K T L E A E I R E L E S R S
gm024206_Glyma0    S E R N R R K K L N E R L F A L R S V V P N I S K M D K A S I I K D A I E Y I Q H L H E Q E K I I Q A E I M E L E S G M
pt009252_POPTR_    S E R N R R K K L N E R L F A L R A V V P N I S K M D K A S I I K D A I D Y I Q E L H D Q E K Q I Q A E L S E L E S G K
 
AT4G29930.1     T L L E N P V R D Y D C N F A E T H L Q D F S D N N D M R S K K F K - - - Q M D Y S T R V Q H Y P I E V L E M K V T W M
gm024206_Glyma0    P - - - - - - R K S P - S Y G - F E Q E Q L P - - V V L R S K K K R T E - Q L Y D S V T S R N T P I E V L E L R V T Y M
pt009252_POPTR_    S - - - - - - K K N Q G G F G V Y Y H Q E L P - - V L L R S K K K K I D Y Q F C D F G G S K I S P I E L L E L R V A Y M
 
AT4G29930.1     G E K T V V V C I T C S K K R E T M V Q L C K V L E S L N L N I L T T N F S S F T S R L S T T L F L Q A D E E E S S A V
gm024206_Glyma0    G E K T V V V S L T C S K R T D T M V K L C E V F E S L K L K I I T A N I T S F S G R L L K T V F I E A N E E E K D H L
pt009252_POPTR_    G E N T L L V S L T C N K R T D T M V K L C E V F E S L G L K I I T A N I T T V S G R V L K T V F I E A D E E E K D K L
 
AT4G29930.1     E A K I Q M A I A A Y - N D P N C L I N F
gm024206_Glyma0    Q I K I Q T A I K A L N N D P L S P M S I
pt009252_POPTR_    K I R I E A A I A A L - N D P P S P M S M
 
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