Input
| Putative repression domain
|
|
AT4G29930.1 |
not found |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt009252 |
not found in 249aa |
AT5G57150.1 |
1st_not |
0.453917050 |
II |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT4G29930.1 ---MEDLDHEYKNYWETTMFFQNQELEFDSWPMEEAFSGSGESSSPDGAATSPASSKNVV
pt009252_POPTR_ MEPIENIGEEYQNYWETKMFLQNEEL--DSWAIDEAFSGYYDSSSPDGAASS-AATKNIV
:*::..**:*****.**:**:** ***.::***** :********:* *::**:*
AT4G29930.1 SERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRELESRS
pt009252_POPTR_ SERNRRKKLNERLFALRAVVPNISKMDKASIIKDAIDYIQELHDQEKQIQAELSELESGK
******:***:******:*******:****:***:***:*** **** ::**: **** .
AT4G29930.1 TLLENPVRDYDCNFAETHLQDFSDNNDMRSKKFKQMDYS------TRVQHYPIEVLEMKV
pt009252_POPTR_ S------KKNQGGFGVYYHQELP--VLLRSKK-KKIDYQFCDFGGSKIS--PIELLELRV
: :. : .*. : *::. :**** *::**. :::. ***:**::*
AT4G29930.1 TWMGEKTVVVCITCSKKRETMVQLCKVLESLNLNILTTNFSSFTSRLSTTLFLQADEEES
pt009252_POPTR_ AYMGENTLLVSLTCNKRTDTMVKLCEVFESLGLKIITANITTVSGRVLKTVFIEADEEEK
::***:*::*.:**.*: :***:**:*:***.*:*:*:*:::.:.*: .*:*::*****.
AT4G29930.1 SAVEAKIQMAIAAYNDPNCLINF
pt009252_POPTR_ DKLKIRIEAAIAALNDPPSPMSM
. :: :*: **** *** . :.:
BoxShade v3.31 C (beta, 970507) Output
AT4G29930.1 |
- |
- |
- |
M |
E |
D |
L |
D |
H |
E |
Y |
K |
N |
Y |
W |
E |
T |
T |
M |
F |
F |
Q |
N |
Q |
E |
L |
E |
F |
D |
S |
W |
P |
M |
E |
E |
A |
F |
S |
G |
S |
G |
E |
S |
S |
S |
P |
D |
G |
A |
A |
T |
S |
P |
A |
S |
S |
K |
N |
V |
V |
pt009252_POPTR_ |
M |
E |
P |
I |
E |
N |
I |
G |
E |
E |
Y |
Q |
N |
Y |
W |
E |
T |
K |
M |
F |
L |
Q |
N |
E |
E |
L |
- |
- |
D |
S |
W |
A |
I |
D |
E |
A |
F |
S |
G |
Y |
Y |
D |
S |
S |
S |
P |
D |
G |
A |
A |
S |
S |
- |
A |
A |
T |
K |
N |
I |
V |
|
AT4G29930.1 |
S |
E |
R |
N |
R |
R |
Q |
K |
L |
N |
Q |
R |
L |
F |
A |
L |
R |
S |
V |
V |
P |
N |
I |
S |
K |
L |
D |
K |
A |
S |
V |
I |
K |
D |
S |
I |
D |
Y |
M |
Q |
E |
L |
I |
D |
Q |
E |
K |
T |
L |
E |
A |
E |
I |
R |
E |
L |
E |
S |
R |
S |
pt009252_POPTR_ |
S |
E |
R |
N |
R |
R |
K |
K |
L |
N |
E |
R |
L |
F |
A |
L |
R |
A |
V |
V |
P |
N |
I |
S |
K |
M |
D |
K |
A |
S |
I |
I |
K |
D |
A |
I |
D |
Y |
I |
Q |
E |
L |
H |
D |
Q |
E |
K |
Q |
I |
Q |
A |
E |
L |
S |
E |
L |
E |
S |
G |
K |
|
AT4G29930.1 |
T |
L |
L |
E |
N |
P |
V |
R |
D |
Y |
D |
C |
N |
F |
A |
E |
T |
H |
L |
Q |
D |
F |
S |
D |
N |
N |
D |
M |
R |
S |
K |
K |
F |
K |
Q |
M |
D |
Y |
S |
- |
- |
- |
- |
- |
- |
T |
R |
V |
Q |
H |
Y |
P |
I |
E |
V |
L |
E |
M |
K |
V |
pt009252_POPTR_ |
S |
- |
- |
- |
- |
- |
- |
K |
K |
N |
Q |
G |
G |
F |
G |
V |
Y |
Y |
H |
Q |
E |
L |
P |
- |
- |
V |
L |
L |
R |
S |
K |
K |
- |
K |
K |
I |
D |
Y |
Q |
F |
C |
D |
F |
G |
G |
S |
K |
I |
S |
- |
- |
P |
I |
E |
L |
L |
E |
L |
R |
V |
|
AT4G29930.1 |
T |
W |
M |
G |
E |
K |
T |
V |
V |
V |
C |
I |
T |
C |
S |
K |
K |
R |
E |
T |
M |
V |
Q |
L |
C |
K |
V |
L |
E |
S |
L |
N |
L |
N |
I |
L |
T |
T |
N |
F |
S |
S |
F |
T |
S |
R |
L |
S |
T |
T |
L |
F |
L |
Q |
A |
D |
E |
E |
E |
S |
pt009252_POPTR_ |
A |
Y |
M |
G |
E |
N |
T |
L |
L |
V |
S |
L |
T |
C |
N |
K |
R |
T |
D |
T |
M |
V |
K |
L |
C |
E |
V |
F |
E |
S |
L |
G |
L |
K |
I |
I |
T |
A |
N |
I |
T |
T |
V |
S |
G |
R |
V |
L |
K |
T |
V |
F |
I |
E |
A |
D |
E |
E |
E |
K |
|
AT4G29930.1 |
S |
A |
V |
E |
A |
K |
I |
Q |
M |
A |
I |
A |
A |
Y |
N |
D |
P |
N |
C |
L |
I |
N |
F |
pt009252_POPTR_ |
D |
K |
L |
K |
I |
R |
I |
E |
A |
A |
I |
A |
A |
L |
N |
D |
P |
P |
S |
P |
M |
S |
M |
|
|