fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G30980.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm046360 not found in 365aa AT2G24260.1 1st_not 0.434959349 II
Pt009623 not found in 455aa AT2G24260.1 1st_not 0.408536585 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G30980.1     -------MNS----SSLLTPSS----------SPSPHLQSPATFD-----HDDFLHHIFS
pt009623_POPTR_ MQPCSREMQG---INSLLNPSSQIPLQDLQNQQNPSQIQN-SHFDPNSSSNDDFLEQMLS
gm046360_Glyma1 MQPCSREMQGPNTTNSLFNNNTTC--------SNQPQI----HFD--TTSNDDFLKQMLS
                       *:.    .**:. .:          .  .::     **     :****.:::*

AT4G30980.1     STP---WP--SSVLDDTPPPTS---------------DCAPVT------GFHHH-D----
pt009623_POPTR_ NIPPCSWPDLKSPWDLTMPINNNDSSNSIAKPRDLSDETAPSNTDNSNLGFHNNFDESVI
gm046360_Glyma1 NLPSSSW-----TLDQTTPDNN------VVFPYDVE---------------HAN------
                . *   *       * * * ..                             * :      

AT4G30980.1     ----------------------------------ADSRNQITMIPLSHNHPND-------
pt009623_POPTR_ LASKLRQHQISGGGGAAAAAKMMLQQQLLM----AAARGVL--------PQNDVIDGSSF
gm046360_Glyma1 LASKFRNHQITTDNDKASA--LMLHHHLLLSSSAAAANSQLLHMPFDSSAPNDVVDAPSF
                                                  * :.. :          **       

AT4G30980.1     -------------ALFNGFS----TGSLP--------FHLPQGSGGQTQT---QSQAT--
pt009623_POPTR_ K-----GGDGSMQGLFNGFGAGSMNGTGQASNQSMQHFNHPQGGAMQAQNFGAQGAATTA
gm046360_Glyma1 KSLTPNGEPASVQALYNGF-----SGSLQPNNQTHHFQQHPQP---QGQSFGASAPA---
                             .*:***     .*:           : **    * *.   .. *   

AT4G30980.1     ------ASATTGGATAQPQTKPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNG
pt009623_POPTR_ VMNQPQASGSNGGAPAQP--RQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNA
gm046360_Glyma1 ----------NGGGSGQP--KQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNA
                          .**...**  : :****************************:*******.

AT4G30980.1     NKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAASASSQISE---DAGG----------
pt009623_POPTR_ NKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADMSSEAGGDCIQASADGG
gm046360_Glyma1 NKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVA----EGGGDCIQA-----
                ***********************************:.:. ::    :.**          

AT4G30980.1     ---SHENTSSS-----GEAKMTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATTISTA
pt009623_POPTR_ SLSRTSNGNQTARTNDSSLTVTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISTA
gm046360_Glyma1 ---KRSNSN-------DSLAMTEQQVAKLMEEDMGSAMQYLQGKGLCLMPISLASAISKA
                     .* .       ..  :**:******************************::**.*

AT4G30980.1     TCPSRSPFVK---------DTGVPLSPNLSTTIVANGN----GSSLVTVKDAPSVSKP
pt009623_POPTR_ TCHNRSPAINNNHHALLQSNGEGPASPSMSVLTVQSATMGNVGGDGGAVKDAASVSKP
gm046360_Glyma1 TCH---PFI----------NGDGPSSPRMSALTLANAV----------VKDAASVSKS
                **    * :          :   * ** :*.  : ..           ****.****.
BoxShade v3.31 C (beta, 970507) Output
AT4G30980.1     - - - - - - - M N S - - - - S S L L T P S S - - - - - - - - - - S P S P H L Q S P A T F D - - - - - H D D F L H H I F S
pt009623_POPTR_    M Q P C S R E M Q G - - - I N S L L N P S S Q I P L Q D L Q N Q Q N P S Q I Q N - S H F D P N S S S N D D F L E Q M L S
gm046360_Glyma1    M Q P C S R E M Q G P N T T N S L F N N N T T C - - - - - - - - S N Q P Q I - - - - H F D - - T T S N D D F L K Q M L S
 
AT4G30980.1     S T P - - - W P - - S S V L D D T P P P T S - - - - - - - - - - - - - - - D C A P V T - - - - - - G F H H H - D - - - -
pt009623_POPTR_    N I P P C S W P D L K S P W D L T M P I N N N D S S N S I A K P R D L S D E T A P S N T D N S N L G F H N N F D E S V I
gm046360_Glyma1    N L P S S S W - - - - - T L D Q T T P D N N - - - - - - V V F P Y D V E - - - - - - - - - - - - - - - H A N - - - - - -
 
AT4G30980.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - A D S R N Q I T M I P L S H N H P N D - - - - - - -
pt009623_POPTR_    L A S K L R Q H Q I S G G G G A A A A A K M M L Q Q Q L L M - - - - A A A R G V L - - - - - - - - P Q N D V I D G S S F
gm046360_Glyma1    L A S K F R N H Q I T T D N D K A S A - - L M L H H H L L L S S S A A A A N S Q L L H M P F D S S A P N D V V D A P S F
 
AT4G30980.1     - - - - - - - - - - - - - A L F N G F S - - - - T G S L P - - - - - - - - F H L P Q G S G G Q T Q T - - - Q S Q A T - -
pt009623_POPTR_    K - - - - - G G D G S M Q G L F N G F G A G S M N G T G Q A S N Q S M Q H F N H P Q G G A M Q A Q N F G A Q G A A T T A
gm046360_Glyma1    K S L T P N G E P A S V Q A L Y N G F - - - - - S G S L Q P N N Q T H H F Q Q H P Q P - - - Q G Q S F G A S A P A - - -
 
AT4G30980.1     - - - - - - A S A T T G G A T A Q P Q T K P K V R A R R G Q A T D P H S I A E R L R R E R I A E R M K S L Q E L V P N G
pt009623_POPTR_    V M N Q P Q A S G S N G G A P A Q P - - R Q R V R A R R G Q A T D P H S I A E R L R R E R I A E R M K A L Q E L V P N A
gm046360_Glyma1    - - - - - - - - - - N G G G S G Q P - - K Q R V R A R R G Q A T D P H S I A E R L R R E R I A E R M K A L Q E L V P N A
 
AT4G30980.1     N K T D K A S M L D E I I D Y V K F L Q L Q V K V L S M S R L G G A A S A S S Q I S E - - - D A G G - - - - - - - - - -
pt009623_POPTR_    N K T D K A S M L D E I I D Y V K F L Q L Q V K V L S M S R L G G A A A V A P L V A D M S S E A G G D C I Q A S A D G G
gm046360_Glyma1    N K T D K A S M L D E I I D Y V K F L Q L Q V K V L S M S R L G G A A A V A P L V A - - - - E G G G D C I Q A - - - - -
 
AT4G30980.1     - - - S H E N T S S S - - - - - G E A K M T E H Q V A K L M E E D M G S A M Q Y L Q G K G L C L M P I S L A T T I S T A
pt009623_POPTR_    S L S R T S N G N Q T A R T N D S S L T V T E H Q V A K L M E E D M G S A M Q Y L Q G K G L C L M P I S L A T A I S T A
gm046360_Glyma1    - - - K R S N S N - - - - - - - D S L A M T E Q Q V A K L M E E D M G S A M Q Y L Q G K G L C L M P I S L A S A I S K A
 
AT4G30980.1     T C P S R S P F V K - - - - - - - - - D T G V P L S P N L S T T I V A N G N - - - - G S S L V T V K D A P S V S K P
pt009623_POPTR_    T C H N R S P A I N N N H H A L L Q S N G E G P A S P S M S V L T V Q S A T M G N V G G D G G A V K D A A S V S K P
gm046360_Glyma1    T C H - - - P F I - - - - - - - - - - N G D G P S S P R M S A L T L A N A V - - - - - - - - - - V K D A A S V S K S
 
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