fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G30980.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt009623 not found in 455aa AT2G24260.1 1st_not 0.408536585 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G30980.1     --------MNSSSLLTPSSS-PSPHLQS-------------PATFDHDDFLHHIFSS---
pt009623_POPTR_ MQPCSREMQGINSLLNPSSQIPLQDLQNQQNPSQIQNSHFDPNSSSNDDFLEQMLSNIPP
                         . .***.***. *  .**.             * : .:****.:::*.   

AT4G30980.1     -------TPW-----------------PSSVLDDTPPPTSDCAPVTGFHHHDADS-----
pt009623_POPTR_ CSWPDLKSPWDLTMPINNNDSSNSIAKPRDLSDETAPSNTDNSNL-GFHNNFDESVILAS
                       :**                 * .: *:*.*..:* : : ***::  :*     

AT4G30980.1     ---------------------RNQITMIPLSHNHP-ND---------------ALFNGFS
pt009623_POPTR_ KLRQHQISGGGGAAAAAKMMLQQQLLMAAARGVLPQNDVIDGSSFKGGDGSMQGLFNGFG
                                     ::*: * .     * **               .*****.

AT4G30980.1     TGSLP------------FHLPQGSGGQTQT-----------QSQATASATTGGATAQPQT
pt009623_POPTR_ AGSMNGTGQASNQSMQHFNHPQGGAMQAQNFGAQGAATTAVMNQPQASGSNGGAPAQP--
                :**:             *: ***.. *:*.            .*. **.:.***.***  

AT4G30980.1     KPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQ
pt009623_POPTR_ RQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQ
                : :****************************:*******.********************

AT4G30980.1     LQVKVLSMSRLGGAASAS---SQISEDAGGSHENTSSSGEA------------------K
pt009623_POPTR_ LQVKVLSMSRLGGAAAVAPLVADMSSEAGGDCIQASADGGSLSRTSNGNQTARTNDSSLT
                ***************:.:   :::*.:***.  ::*:.* :                  .

AT4G30980.1     MTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATTISTATCPSRSPFVKDT--------
pt009623_POPTR_ VTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISTATCHNRSPAINNNHHALLQSN
                :**********************************:****** .*** :::.        

AT4G30980.1     --GVPLSPNLSTTIVAN-------GNGSSLVTVKDAPSVSKP
pt009623_POPTR_ GEG-PASPSMSVLTVQSATMGNVGGDGGA---VKDAASVSKP
                  * * **.:*.  * .       *:*.:   ****.*****
BoxShade v3.31 C (beta, 970507) Output
AT4G30980.1     - - - - - - - - M N S S S L L T P S S S - P S P H L Q S - - - - - - - - - - - - - P A T F D H D D F L H H I F S S - - -
pt009623_POPTR_    M Q P C S R E M Q G I N S L L N P S S Q I P L Q D L Q N Q Q N P S Q I Q N S H F D P N S S S N D D F L E Q M L S N I P P
 
AT4G30980.1     - - - - - - - T P W - - - - - - - - - - - - - - - - - P S S V L D D T P P P T S D C A P V T G F H H H D A D S - - - - -
pt009623_POPTR_    C S W P D L K S P W D L T M P I N N N D S S N S I A K P R D L S D E T A P S N T D N S N L - G F H N N F D E S V I L A S
 
AT4G30980.1     - - - - - - - - - - - - - - - - - - - - - R N Q I T M I P L S H N H P - N D - - - - - - - - - - - - - - - A L F N G F S
pt009623_POPTR_    K L R Q H Q I S G G G G A A A A A K M M L Q Q Q L L M A A A R G V L P Q N D V I D G S S F K G G D G S M Q G L F N G F G
 
AT4G30980.1     T G S L P - - - - - - - - - - - - F H L P Q G S G G Q T Q T - - - - - - - - - - - Q S Q A T A S A T T G G A T A Q P Q T
pt009623_POPTR_    A G S M N G T G Q A S N Q S M Q H F N H P Q G G A M Q A Q N F G A Q G A A T T A V M N Q P Q A S G S N G G A P A Q P - -
 
AT4G30980.1     K P K V R A R R G Q A T D P H S I A E R L R R E R I A E R M K S L Q E L V P N G N K T D K A S M L D E I I D Y V K F L Q
pt009623_POPTR_    R Q R V R A R R G Q A T D P H S I A E R L R R E R I A E R M K A L Q E L V P N A N K T D K A S M L D E I I D Y V K F L Q
 
AT4G30980.1     L Q V K V L S M S R L G G A A S A S - - - S Q I S E D A G G S H E N T S S S G E A - - - - - - - - - - - - - - - - - - K
pt009623_POPTR_    L Q V K V L S M S R L G G A A A V A P L V A D M S S E A G G D C I Q A S A D G G S L S R T S N G N Q T A R T N D S S L T
 
AT4G30980.1     M T E H Q V A K L M E E D M G S A M Q Y L Q G K G L C L M P I S L A T T I S T A T C P S R S P F V K D T - - - - - - - -
pt009623_POPTR_    V T E H Q V A K L M E E D M G S A M Q Y L Q G K G L C L M P I S L A T A I S T A T C H N R S P A I N N N H H A L L Q S N
 
AT4G30980.1     - - G V P L S P N L S T T I V A N - - - - - - - G N G S S L V T V K D A P S V S K P
pt009623_POPTR_    G E G - P A S P S M S V L T V Q S A T M G N V G G D G G A - - - V K D A A S V S K P
 
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