fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G30980.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm046360 not found in 365aa AT2G24260.1 1st_not 0.434959349 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G30980.1     ----------MNSSSLL-----TPSSSPSPHLQSPATFDHDDFLHHIFSSTPWPSSVLDD
gm046360_Glyma1 MQPCSREMQGPNTTNSLFNNNTTCSNQPQIHFD---TTSNDDFLKQMLSNLPSSSWTLDQ
                           *::. *     * *..*. *::   * .:****::::*. * .* .**:

AT4G30980.1     TPPPT-------------------------SDCAPVTGFHHH------DADSRNQITMIP
gm046360_Glyma1 TTPDNNVVFPYDVEHANLASKFRNHQITTDNDKASALMLHHHLLLSSSAAAANSQLLHMP
                *.* .                         .* *..  :***       * :..*:  :*

AT4G30980.1     LSHNHPND--------------------ALFNGFSTGSL-----PFHLPQGSGGQTQTQS
gm046360_Glyma1 FDSSAPNDVVDAPSFKSLTPNGEPASVQALYNGFS-GSLQPNNQTHHFQQHP--QPQGQS
                :. . ***                    **:**** ***     ..*: * .  *.* **

AT4G30980.1     QATASATTGGATAQPQTKPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKT
gm046360_Glyma1 FGASAPANGGGSGQP--KQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKT
                 .:::.:.**.:.**  * :****************************:*******.***

AT4G30980.1     DKASMLDEIIDYVKFLQLQVKVLSMSRLGGAASASSQISEDAGG--SHENTSSSGEAKMT
gm046360_Glyma1 DKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVAEGGGDCIQAKRSNSNDSLAMT
                ********************************:.:. ::*..*.  . :.:.*...  **

AT4G30980.1     EHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATTISTATCPSRSPFVKDTGVPLSPNLST
gm046360_Glyma1 EQQVAKLMEEDMGSAMQYLQGKGLCLMPISLASAISKATC---HPFINGDG-PSSPRMSA
                *:******************************::**.***    **::. * * **.:*:

AT4G30980.1     TIVANGNGSSLVTVKDAPSVSKP
gm046360_Glyma1 LTLANA------VVKDAASVSKS
                  :**.      .****.****.
BoxShade v3.31 C (beta, 970507) Output
AT4G30980.1     - - - - - - - - - - M N S S S L L - - - - - T P S S S P S P H L Q S P A T F D H D D F L H H I F S S T P W P S S V L D D
gm046360_Glyma1    M Q P C S R E M Q G P N T T N S L F N N N T T C S N Q P Q I H F D - - - T T S N D D F L K Q M L S N L P S S S W T L D Q
 
AT4G30980.1     T P P P T - - - - - - - - - - - - - - - - - - - - - - - - - S D C A P V T G F H H H - - - - - - D A D S R N Q I T M I P
gm046360_Glyma1    T T P D N N V V F P Y D V E H A N L A S K F R N H Q I T T D N D K A S A L M L H H H L L L S S S A A A A N S Q L L H M P
 
AT4G30980.1     L S H N H P N D - - - - - - - - - - - - - - - - - - - - A L F N G F S T G S L - - - - - P F H L P Q G S G G Q T Q T Q S
gm046360_Glyma1    F D S S A P N D V V D A P S F K S L T P N G E P A S V Q A L Y N G F S - G S L Q P N N Q T H H F Q Q H P - - Q P Q G Q S
 
AT4G30980.1     Q A T A S A T T G G A T A Q P Q T K P K V R A R R G Q A T D P H S I A E R L R R E R I A E R M K S L Q E L V P N G N K T
gm046360_Glyma1    F G A S A P A N G G G S G Q P - - K Q R V R A R R G Q A T D P H S I A E R L R R E R I A E R M K A L Q E L V P N A N K T
 
AT4G30980.1     D K A S M L D E I I D Y V K F L Q L Q V K V L S M S R L G G A A S A S S Q I S E D A G G - - S H E N T S S S G E A K M T
gm046360_Glyma1    D K A S M L D E I I D Y V K F L Q L Q V K V L S M S R L G G A A A V A P L V A E G G G D C I Q A K R S N S N D S L A M T
 
AT4G30980.1     E H Q V A K L M E E D M G S A M Q Y L Q G K G L C L M P I S L A T T I S T A T C P S R S P F V K D T G V P L S P N L S T
gm046360_Glyma1    E Q Q V A K L M E E D M G S A M Q Y L Q G K G L C L M P I S L A S A I S K A T C - - - H P F I N G D G - P S S P R M S A
 
AT4G30980.1     T I V A N G N G S S L V T V K D A P S V S K P
gm046360_Glyma1    L T L A N A - - - - - - V V K D A A S V S K S
 
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