fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G31060.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt005891 not found in 178aa AT4G31060.1 1st_1st 0.495750708 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G31060.1     MPP----SPPKSPFISSSLKGAHEDRKFKCYRGVRKRSWGKWVSEIRVPKTGRRIWLGSY
pt005891_POPTR_ MDPCKSSAPPKK---------VRQGRNSGTYRGVRMRTWGKWVSEIRVPKTGQRIWLGSY
                * *    :***.         .::.*:   ***** *:**************:*******

AT4G31060.1     DAPEKAARAYDAALFCIRGEKGVYNFPTDKKPQLPEGSVRPLSKLDIQTIATNYASSVVH
pt005891_POPTR_ DAPEKAARAYDAAQYCIRGERGQFNFPAERRPQLPSGPVDALSKKEIKAIAFNFAS----
                ************* :*****:* :***::::****.*.* .*** :*::** *:**    

AT4G31060.1     VPSHATTLPATTQVPSEVPASS----DVSASTEITEMVDEYYLPTDATAESIFSVEDLQL
pt005891_POPTR_ --SNASSVSPSVITPVEMVEPSLPNLQVSSATGNAGNV-EGYVPASASVPDLCSIDNLQL
                  *:*:::..:. .* *:  .*    :**::*  :  * * *:*:.*:. .: *:::***

AT4G31060.1     DSFLMMDIDWINNLI
pt005891_POPTR_ DDLLMLDIEWIDSL-
                *.:**:**:**:.*
BoxShade v3.31 C (beta, 970507) Output
AT4G31060.1     M P P - - - - S P P K S P F I S S S L K G A H E D R K F K C Y R G V R K R S W G K W V S E I R V P K T G R R I W L G S Y
pt005891_POPTR_    M D P C K S S A P P K K - - - - - - - - - V R Q G R N S G T Y R G V R M R T W G K W V S E I R V P K T G Q R I W L G S Y
 
AT4G31060.1     D A P E K A A R A Y D A A L F C I R G E K G V Y N F P T D K K P Q L P E G S V R P L S K L D I Q T I A T N Y A S S V V H
pt005891_POPTR_    D A P E K A A R A Y D A A Q Y C I R G E R G Q F N F P A E R R P Q L P S G P V D A L S K K E I K A I A F N F A S - - - -
 
AT4G31060.1     V P S H A T T L P A T T Q V P S E V P A S S - - - - D V S A S T E I T E M V D E Y Y L P T D A T A E S I F S V E D L Q L
pt005891_POPTR_    - - S N A S S V S P S V I T P V E M V E P S L P N L Q V S S A T G N A G N V - E G Y V P A S A S V P D L C S I D N L Q L
 
AT4G31060.1     D S F L M M D I D W I N N L I
pt005891_POPTR_    D D L L M L D I E W I D S L -
 
0