fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G32280.1 MELDLGLSLSPHKS at 3/251 in AT4G32280.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm009124 not found in 226aa AT4G32280.1 1st_1st 0.245238095 Ib
Pt005005 MELQLGLSLPTYNF in 4/229 AT4G32280.1 1st_1st 0.290476190 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G32280.1     MELDLGLSLSPHKSSKLGFNFDLNK-----HCAIEGA----ASC-------LGTEKLRFE
pt005005_POPTR_ MELQLGLSLPTYNFIE---NFDLNNGGFEPKDQMLGSKPW-ISC---EDGNYLDNKRSFE
gm009124_Glyma0 MEVDLVLALPTQNSVE---EFKLNK-----SKQIVSLQLWRASCGSESEKRVKHNKRSFE
                **::* *:*.. :  :   :*.**:        : .      **          :*  **

AT4G32280.1     ATFGLGNVEENCYMPKQRLFALNGQPNEEDEDP--LESESSI---VYDDEEENSEVVGWP
pt005005_POPTR_ VAFEKNIKDASQELP---LLLWSGQPNDEDDWNGEKKISRSI---NKDDEEEN-QVVGWP
gm009124_Glyma0 ESFGHFLK----PLP---LLVWSGQPNEEDDRS--EKVQRNIHIPNKNGDEEN-HLVGWP
                 :*          :*   *:  .****:**:     : . .*     :.:*** .:****

AT4G32280.1     PVKTCMIKYGSYHHRHIRNHHHCPYHHRGRRI-TAMNNNISNPTTATVGSSSSSSISSRS
pt005005_POPTR_ PIK-------SWRKKVLHHQHQAGHVVNSTRMATAGNYEYG---------------TGSN
gm009124_Glyma0 PVK-------SWRRKELHQQHPARGRIRNDRI--QANENQS---------------RGPN
                *:*       *:::: ::::* .    .. *:    * : .                . .

AT4G32280.1     SMYVKVKMDGVAIARKVDIKLFNSYESLTNSLITMFTEYEDCDREDTNYTFTFQGKEGDW
pt005005_POPTR_ SKYVKVKMEGVAITRKIDLRLYNSYQTLTKSLISMFAKCKNLEKDAARYSLTYQDKDGDW
gm009124_Glyma0 SLYVKVNMEGVAIGRKINLRLFNSYQTLTSSLISMFAKYQKFEEVGESYTLTFQNEQGEW
                * ****:*:**** **::::*:***::**.***:**:: :. :.    *::*:*.::*:*

AT4G32280.1     LLRGDVTWKIFAESVHRISIIRDRPCAYTRCLF
pt005005_POPTR_ LIAGDVPWQTFMESVQRLKIVRNAG--------
gm009124_Glyma0 LQVGHVPWQSFIGTVRRLVILRNGSETI-----
                *  *.*.*: *  :*:*: *:*:
BoxShade v3.31 C (beta, 970507) Output
AT4G32280.1     M E L D L G L S L S P H K S S K L G F N F D L N K - - - - - H C A I E G A - - - - A S C - - - - - - - L G T E K L R F E
pt005005_POPTR_    M E L Q L G L S L P T Y N F I E - - - N F D L N N G G F E P K D Q M L G S K P W - I S C - - - E D G N Y L D N K R S F E
gm009124_Glyma0    M E V D L V L A L P T Q N S V E - - - E F K L N K - - - - - S K Q I V S L Q L W R A S C G S E S E K R V K H N K R S F E
 
AT4G32280.1     A T F G L G N V E E N C Y M P K Q R L F A L N G Q P N E E D E D P - - L E S E S S I - - - V Y D D E E E N S E V V G W P
pt005005_POPTR_    V A F E K N I K D A S Q E L P - - - L L L W S G Q P N D E D D W N G E K K I S R S I - - - N K D D E E E N - Q V V G W P
gm009124_Glyma0    E S F G H F L K - - - - P L P - - - L L V W S G Q P N E E D D R S - - E K V Q R N I H I P N K N G D E E N - H L V G W P
 
AT4G32280.1     P V K T C M I K Y G S Y H H R H I R N H H H C P Y H H R G R R I - T A M N N N I S N P T T A T V G S S S S S S I S S R S
pt005005_POPTR_    P I K - - - - - - - S W R K K V L H H Q H Q A G H V V N S T R M A T A G N Y E Y G - - - - - - - - - - - - - - - T G S N
gm009124_Glyma0    P V K - - - - - - - S W R R K E L H Q Q H P A R G R I R N D R I - - Q A N E N Q S - - - - - - - - - - - - - - - R G P N
 
AT4G32280.1     S M Y V K V K M D G V A I A R K V D I K L F N S Y E S L T N S L I T M F T E Y E D C D R E D T N Y T F T F Q G K E G D W
pt005005_POPTR_    S K Y V K V K M E G V A I T R K I D L R L Y N S Y Q T L T K S L I S M F A K C K N L E K D A A R Y S L T Y Q D K D G D W
gm009124_Glyma0    S L Y V K V N M E G V A I G R K I N L R L F N S Y Q T L T S S L I S M F A K Y Q K F E E V G E S Y T L T F Q N E Q G E W
 
AT4G32280.1     L L R G D V T W K I F A E S V H R I S I I R D R P C A Y T R C L F
pt005005_POPTR_    L I A G D V P W Q T F M E S V Q R L K I V R N A G - - - - - - - -
gm009124_Glyma0    L Q V G H V P W Q S F I G T V R R L V I L R N G S E T I - - - - -
 
0