fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G32280.1 MELDLGLSLSPHKS at 3/251 in AT4G32280.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt005005 MELQLGLSLPTYNF in 4/229 AT4G32280.1 1st_1st 0.290476190 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G32280.1     MELDLGLSLSPHKSSKLGFNFDLNKHCAIEGAASCLGTE-------------KLRFEATF
pt005005_POPTR_ MELQLGLSLPTYNFIE---NFDLN-NGGFEPKDQMLGSKPWISCEDGNYLDNKRSFEVAF
                ***:*****..::  :   ***** : .:*   . **::             *  **.:*

AT4G32280.1     GLGNVEENCYMPKQRLFAL--NGQPNEEDEDPLESE--SSIVYDDEEENSEVVGWPPVKT
pt005005_POPTR_ -----EKNIKDASQELPLLLWSGQPNDEDDWNGEKKISRSINKDDEEEN-QVVGWPPIKS
                     *:*   ..*.*  *  .****:**:   *.:   **  ****** :******:*:

AT4G32280.1     CMIKYGSYHHRHIRNHHHCPYHHRGRRITAMNNNISNPT-TATVGSSSSSSISSRSSMYV
pt005005_POPTR_ WRKKV--LHHQHQAGH------------------VVNSTRMATAGNYEYGTGS--NSKYV
                   *    **:*  .*                  : *.*  **.*. . .: *  .* **

AT4G32280.1     KVKMDGVAIARKVDIKLFNSYESLTNSLITMFTEYEDCDREDTNYTFTFQGKEGDWLLRG
pt005005_POPTR_ KVKMEGVAITRKIDLRLYNSYQTLTKSLISMFAKCKNLEKDAARYSLTYQDKDGDWLIAG
                ****:****:**:*::*:***::**:***:**:: :: ::: :.*::*:*.*:****: *

AT4G32280.1     DVTWKIFAESVHRISIIRDRPCAYTRCLF
pt005005_POPTR_ DVPWQTFMESVQRLKIVRNAG--------
                **.*: * ***:*:.*:*:
BoxShade v3.31 C (beta, 970507) Output
AT4G32280.1     M E L D L G L S L S P H K S S K L G F N F D L N K H C A I E G A A S C L G T E - - - - - - - - - - - - - K L R F E A T F
pt005005_POPTR_    M E L Q L G L S L P T Y N F I E - - - N F D L N - N G G F E P K D Q M L G S K P W I S C E D G N Y L D N K R S F E V A F
 
AT4G32280.1     G L G N V E E N C Y M P K Q R L F A L - - N G Q P N E E D E D P L E S E - - S S I V Y D D E E E N S E V V G W P P V K T
pt005005_POPTR_    - - - - - E K N I K D A S Q E L P L L L W S G Q P N D E D D W N G E K K I S R S I N K D D E E E N - Q V V G W P P I K S
 
AT4G32280.1     C M I K Y G S Y H H R H I R N H H H C P Y H H R G R R I T A M N N N I S N P T - T A T V G S S S S S S I S S R S S M Y V
pt005005_POPTR_    W R K K V - - L H H Q H Q A G H - - - - - - - - - - - - - - - - - - V V N S T R M A T A G N Y E Y G T G S - - N S K Y V
 
AT4G32280.1     K V K M D G V A I A R K V D I K L F N S Y E S L T N S L I T M F T E Y E D C D R E D T N Y T F T F Q G K E G D W L L R G
pt005005_POPTR_    K V K M E G V A I T R K I D L R L Y N S Y Q T L T K S L I S M F A K C K N L E K D A A R Y S L T Y Q D K D G D W L I A G
 
AT4G32280.1     D V T W K I F A E S V H R I S I I R D R P C A Y T R C L F
pt005005_POPTR_    D V P W Q T F M E S V Q R L K I V R N A G - - - - - - - -
 
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