fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G32800.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt008221 not found in 250aa AT5G11590.1 1st_not 0.593333333 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G32800.1     MAD-------------------------SSSDKEKK-----------------ENNKQPV
pt008221_POPTR_ MSDHHQQNSETESSSTNSLSPASPSSPLSNSTQSKKPLKDQDFSPSKKIKRIRDSNKHPV
                *:*                         *.* :.**                 :.**:**

AT4G32800.1     YRGVRMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAMRAHDVAAMSIKGTSAILNFPELS
pt008221_POPTR_ YRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNPAILNFPELA
                *******.************************.*** *******:****..********:

AT4G32800.1     KLLPRPVSLSPRDVRAAATKAALMD-FDTTAFRSDTETSETTTSNKMSESSESNETVSFS
pt008221_POPTR_ NYLPRPASLAPRDVQAAAAKAAQMDQFD--------QKSETTT------------TTSPS
                : ****.**:****:***:*** ** **        :.*****            *.* *

AT4G32800.1     SSSWSSVTSI----EESTVSDDLDEIVKLPSLGTSLNE-SNEFVIFDSLEDLVYMPRWLS
pt008221_POPTR_ SSSTSSLTSLVSLMDLSSQEEELCEIVELPSLETSYDELSNDFVYFDSIDEWMYPPPWMQ
                *** **:**:    : *: .::* ***:**** ** :* **:** ***::: :* * *:.

AT4G32800.1     GTEEEV-----------FTYNNNDSSLNYSSVFESWKHFP
pt008221_POPTR_ SMENHCCGGGGGCACDDFTLPNESTVL--------WDY--
                . *:.            **  *:.: *        *.:
BoxShade v3.31 C (beta, 970507) Output
AT4G32800.1     M A D - - - - - - - - - - - - - - - - - - - - - - - - - S S S D K E K K - - - - - - - - - - - - - - - - - E N N K Q P V
pt008221_POPTR_    M S D H H Q Q N S E T E S S S T N S L S P A S P S S P L S N S T Q S K K P L K D Q D F S P S K K I K R I R D S N K H P V
 
AT4G32800.1     Y R G V R M R S W G K W V S E I R E P R K K S R I W L G T F P T A E M A M R A H D V A A M S I K G T S A I L N F P E L S
pt008221_POPTR_    Y R G V R M R N W G K W V S E I R E P R K K S R I W L G T F P T P E M A A R A H D V A A L S I K G N P A I L N F P E L A
 
AT4G32800.1     K L L P R P V S L S P R D V R A A A T K A A L M D - F D T T A F R S D T E T S E T T T S N K M S E S S E S N E T V S F S
pt008221_POPTR_    N Y L P R P A S L A P R D V Q A A A A K A A Q M D Q F D - - - - - - - - Q K S E T T T - - - - - - - - - - - - T T S P S
 
AT4G32800.1     S S S W S S V T S I - - - - E E S T V S D D L D E I V K L P S L G T S L N E - S N E F V I F D S L E D L V Y M P R W L S
pt008221_POPTR_    S S S T S S L T S L V S L M D L S S Q E E E L C E I V E L P S L E T S Y D E L S N D F V Y F D S I D E W M Y P P P W M Q
 
AT4G32800.1     G T E E E V - - - - - - - - - - - F T Y N N N D S S L N Y S S V F E S W K H F P
pt008221_POPTR_    S M E N H C C G G G G G C A C D D F T L P N E S T V L - - - - - - - - W D Y - -
 
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