fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G32800.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os000879 not found in 228aa AT5G11590.1 1st_not 0.466666666 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G32800.1     MADSSSDKEKKEN-------NKQPV--------------------YRGVRMRSWGKWVSE
Os000879_Os01t0 MAASEQSSESSSTASTSSCGKKQQVAGKRKREDVGGGGEQAAAVAYRGVRMRAWGKWVSE
                ** *....*....       :** *                    *******:*******

AT4G32800.1     IREPRKKSRIWLGTFPTAEMAMRAHDVAAMSIKGTSAILNFPELSKLLPRPVSLSPRDVR
Os000879_Os01t0 IREPRKKSRIWLGTFPCPEMAARAHDVAALSIKGARAVLNFPDLAPALPRPASLAPRDVQ
                **************** .*** *******:****: *:****:*:  ****.**:****:

AT4G32800.1     AAATKAALMDFDTTAFRSDTETSETTTSNKMSESSESNETVSFSSSSWSSVTSIEESTVS
Os000879_Os01t0 AAAALAAVMHHHKHP-SSSTSTSSPPAAPPPDEHHPRHEPQQ------------PESSRE
                ***: **:*.... .  *.*.**...::   .*    :*. .             **: .

AT4G32800.1     DDLDEIVKLPSLGTSLNESNEFVIFDSLEDLVYMPRWLS-----GTEEEVFTYNNNDSSL
Os000879_Os01t0 DDQQQ---QPAAAAAAQMAVAELVFDELA-----PLWVEDVVEFGTSDHCWTAYDALDPI
                ** ::    *: .:: : :   ::**.*      * *:.     **.:. :*  :  ..:

AT4G32800.1     NYSSVFESWKHFP
Os000879_Os01t0 GFQPLL--WEY--
                .:..::  *::
BoxShade v3.31 C (beta, 970507) Output
AT4G32800.1     M A D S S S D K E K K E N - - - - - - - N K Q P V - - - - - - - - - - - - - - - - - - - - Y R G V R M R S W G K W V S E
Os000879_Os01t0    M A A S E Q S S E S S S T A S T S S C G K K Q Q V A G K R K R E D V G G G G E Q A A A V A Y R G V R M R A W G K W V S E
 
AT4G32800.1     I R E P R K K S R I W L G T F P T A E M A M R A H D V A A M S I K G T S A I L N F P E L S K L L P R P V S L S P R D V R
Os000879_Os01t0    I R E P R K K S R I W L G T F P C P E M A A R A H D V A A L S I K G A R A V L N F P D L A P A L P R P A S L A P R D V Q
 
AT4G32800.1     A A A T K A A L M D F D T T A F R S D T E T S E T T T S N K M S E S S E S N E T V S F S S S S W S S V T S I E E S T V S
Os000879_Os01t0    A A A A L A A V M H H H K H P - S S S T S T S S P P A A P P P D E H H P R H E P Q Q - - - - - - - - - - - - P E S S R E
 
AT4G32800.1     D D L D E I V K L P S L G T S L N E S N E F V I F D S L E D L V Y M P R W L S - - - - - G T E E E V F T Y N N N D S S L
Os000879_Os01t0    D D Q Q Q - - - Q P A A A A A A Q M A V A E L V F D E L A - - - - - P L W V E D V V E F G T S D H C W T A Y D A L D P I
 
AT4G32800.1     N Y S S V F E S W K H F P
Os000879_Os01t0    G F Q P L L - - W E Y - -
 
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