fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G32800.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb007156 not found in 251aa AT5G11590.1 1st_not 0.483333333 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G32800.1     --MADSSSDKE-----------------------------KK--------ENNKQPVYRG
Sb007156_Sorbi1 MAMSELSSDTSSTSSYSSDPSTSTSPRAAAPCSAAAAVSGKKRPRSNGGGESGSAPAYRG
                  *:: ***..                             **        *... *.***

AT4G32800.1     VRMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAMRAHDVAAMSIKGTSAILNFPELSKLL
Sb007156_Sorbi1 VRMRAWGKWVSEIREPRKKSRIWLGTFPCPEMAARAHDVAALSIKGARAVLNFPDLARHL
                ****:*********************** .*** *******:****: *:****:*:: *

AT4G32800.1     PRPVSLSPRDVRAAATKAALMDFDTTAFRSDTETSETTTSNKMSESSESNETVSFSSSSW
Sb007156_Sorbi1 PRPASLAPRDVQAAAARAALMH-----MHSDGAGSGSGSGGSSSPSSSSSSSTRDAADTD
                ***.**:****:***::****.     ::**   * : :... * **.*..:.  ::.: 

AT4G32800.1     SSVTSIEESTVSDDLDEIVKLPSLGTSLNESNEFVIFDSLEDLVYMPRWLSGTEEEVFTY
Sb007156_Sorbi1 GAAAHDEPEPEPEPQRQHERQPV------EMAAELVFDELA-----PLWV----EDVVEF
                .:.:  * .. .:   :  : *       *    ::**.*      * *:    *:*. :

AT4G32800.1     NNNDSSLNYSSV--FES-----------WKHFP
Sb007156_Sorbi1 GGPPSDHTWTPCDGLDAAVGFLHPLPLLWDY--
                ..  *. .::.   :::           *.:
BoxShade v3.31 C (beta, 970507) Output
AT4G32800.1     - - M A D S S S D K E - - - - - - - - - - - - - - - - - - - - - - - - - - - - - K K - - - - - - - - E N N K Q P V Y R G
Sb007156_Sorbi1    M A M S E L S S D T S S T S S Y S S D P S T S T S P R A A A P C S A A A A V S G K K R P R S N G G G E S G S A P A Y R G
 
AT4G32800.1     V R M R S W G K W V S E I R E P R K K S R I W L G T F P T A E M A M R A H D V A A M S I K G T S A I L N F P E L S K L L
Sb007156_Sorbi1    V R M R A W G K W V S E I R E P R K K S R I W L G T F P C P E M A A R A H D V A A L S I K G A R A V L N F P D L A R H L
 
AT4G32800.1     P R P V S L S P R D V R A A A T K A A L M D F D T T A F R S D T E T S E T T T S N K M S E S S E S N E T V S F S S S S W
Sb007156_Sorbi1    P R P A S L A P R D V Q A A A A R A A L M H - - - - - M H S D G A G S G S G S G G S S S P S S S S S S S T R D A A D T D
 
AT4G32800.1     S S V T S I E E S T V S D D L D E I V K L P S L G T S L N E S N E F V I F D S L E D L V Y M P R W L S G T E E E V F T Y
Sb007156_Sorbi1    G A A A H D E P E P E P E P Q R Q H E R Q P V - - - - - - E M A A E L V F D E L A - - - - - P L W V - - - - E D V V E F
 
AT4G32800.1     N N N D S S L N Y S S V - - F E S - - - - - - - - - - - W K H F P
Sb007156_Sorbi1    G G P P S D H T W T P C D G L D A A V G F L H P L P L L W D Y - -
 
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