fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G32800.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm039871 not found in 244aa AT5G11590.1 1st_not 0.573333333 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G32800.1     ---------MADSSS----------------------DKEKKENNKQPVYRGVRMRSWGK
gm039871_Glyma1 MRVSTQNNSETESSSTSFLPPSPSPSPSSPPSSEFKTEKRNRESNKHPVYRGVRMRNWGK
                          ::***                      :*.::*.**:*********.***

AT4G32800.1     WVSEIREPRKKSRIWLGTFPTAEMAMRAHDVAAMSIKGTSAILNFPELSKLLPRPVSLSP
gm039871_Glyma1 WVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAASLPRPVSLAP
                *********************.*** *******:****.*********:  *******:*

AT4G32800.1     RDVRAAATKAALMDFDTTAFRSDTETSETTTSNKMSESSESNETVSFSSSSWSSVTSIE-
gm039871_Glyma1 RDVQAAAAKAAHMDLPSTS---------SSISSSLVPTTQS---ASSSSSSLSSLTSADL
                ***:***:*** **: :*:         :: *..:  :::*   .* **** **:** : 

AT4G32800.1     ESTVSDDLDEIVKLPSLGTSLNE-SNEFVIFDSLEDLVYMP--RWLSGTEEEVFTYNNND
gm039871_Glyma1 LPTASEELSEIIKLPRLETTSYELGNEFVFMDSQDAWMYQPPIPWLHT------TYDGSD
                 .*.*::*.**:*** * *:  * .****::** :  :* *   **        **:..*

AT4G32800.1     SS---LNYSSVFESWKHFP---
gm039871_Glyma1 ADEFVVPESGVVTSFESFLWDY
                :.   :  *.*. *:: *
BoxShade v3.31 C (beta, 970507) Output
AT4G32800.1     - - - - - - - - - M A D S S S - - - - - - - - - - - - - - - - - - - - - - D K E K K E N N K Q P V Y R G V R M R S W G K
gm039871_Glyma1    M R V S T Q N N S E T E S S S T S F L P P S P S P S P S S P P S S E F K T E K R N R E S N K H P V Y R G V R M R N W G K
 
AT4G32800.1     W V S E I R E P R K K S R I W L G T F P T A E M A M R A H D V A A M S I K G T S A I L N F P E L S K L L P R P V S L S P
gm039871_Glyma1    W V S E I R E P R K K S R I W L G T F P T P E M A A R A H D V A A L S I K G N S A I L N F P E L A A S L P R P V S L A P
 
AT4G32800.1     R D V R A A A T K A A L M D F D T T A F R S D T E T S E T T T S N K M S E S S E S N E T V S F S S S S W S S V T S I E -
gm039871_Glyma1    R D V Q A A A A K A A H M D L P S T S - - - - - - - - - S S I S S S L V P T T Q S - - - A S S S S S S L S S L T S A D L
 
AT4G32800.1     E S T V S D D L D E I V K L P S L G T S L N E - S N E F V I F D S L E D L V Y M P - - R W L S G T E E E V F T Y N N N D
gm039871_Glyma1    L P T A S E E L S E I I K L P R L E T T S Y E L G N E F V F M D S Q D A W M Y Q P P I P W L H T - - - - - - T Y D G S D
 
AT4G32800.1     S S - - - L N Y S S V F E S W K H F P - - -
gm039871_Glyma1    A D E F V V P E S G V V T S F E S F L W D Y
 
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