fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G32890.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt008225 not found in 353aa AT5G25830.1 1st_not 0.413988657 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G32890.1     MEKIAPELFLVA-----------------------GNPDSFVVDDLLDFSNDDGEVDDGL
pt008225_POPTR_ ME--APEFYGASGFFSSQFTSNEKHHSLDSNNKSIGGGDHFIVEDLLDFSNED---DDAM
                **  ***:: .:                       *. * *:*:*******:*   **.:

AT4G32890.1     NTLP-DSSTLSTGTLTDSSNSSSLFTDGT------GFSDLYIPNDDIAELEWLSNFVEES
pt008225_POPTR_ ITDPNNNNTIVTAT-TNSTDSSTVTIKETHQYANYGFC-CYVQYDDLAELEWLSNFVEES
                 * * :..*: *.* *:*::**::  . *      **.  *:  **:*************

AT4G32890.1     FAGEDQDKLHLFSGLKNPQTTGSTLTHLIKPEPELDHQFIDIDE-SNV---------AVP
pt008225_POPTR_ FSSEDLQRLQLISGMKARPDESSKSRHFRTHGDTDDNNNGDVSNISNINNTMFNPETAVP
                *:.** ::*:*:**:*     .*.  *: .     *::  *:.: **:         ***

AT4G32890.1     AKARSKRSRSAASTWASRLLSLADSDET-------------NPKKKQRRVKEQDFAGDMD
pt008225_POPTR_ AKARSKRSRAAPGNWASRLLVLSPTTSSSDTEIIAGPTPHPNSGKKTIKVEARQKKRDGG
                *********:*...****** *: : .:             *. **  :*: ::   * .

AT4G32890.1     VDCGESGGGRRCLHCATEKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPASSPTFVM
pt008225_POPTR_ V---EGCDGRKCLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFML
                *   *. .**:******:***********************************:****::

AT4G32890.1     ARHSNSHRKVMELRRQKEM---RDEHLLSQL--RCENLLMDIRSNGEDFLMHNNTNHVAP
pt008225_POPTR_ TKHSNSHRKVLELRRQKEMVRAQQQHQHQQFLHHHQNMVFGVSNGGDDYLIH---QHVGP
                ::********:********   :::*  .*:  : :*:::.: ..*:*:*:*   :**.*

AT4G32890.1     DFRHLI
pt008225_POPTR_ DFRQMI
                ***::*
BoxShade v3.31 C (beta, 970507) Output
AT4G32890.1     M E K I A P E L F L V A - - - - - - - - - - - - - - - - - - - - - - - G N P D S F V V D D L L D F S N D D G E V D D G L
pt008225_POPTR_    M E - - A P E F Y G A S G F F S S Q F T S N E K H H S L D S N N K S I G G G D H F I V E D L L D F S N E D - - - D D A M
 
AT4G32890.1     N T L P - D S S T L S T G T L T D S S N S S S L F T D G T - - - - - - G F S D L Y I P N D D I A E L E W L S N F V E E S
pt008225_POPTR_    I T D P N N N N T I V T A T - T N S T D S S T V T I K E T H Q Y A N Y G F C - C Y V Q Y D D L A E L E W L S N F V E E S
 
AT4G32890.1     F A G E D Q D K L H L F S G L K N P Q T T G S T L T H L I K P E P E L D H Q F I D I D E - S N V - - - - - - - - - A V P
pt008225_POPTR_    F S S E D L Q R L Q L I S G M K A R P D E S S K S R H F R T H G D T D D N N N G D V S N I S N I N N T M F N P E T A V P
 
AT4G32890.1     A K A R S K R S R S A A S T W A S R L L S L A D S D E T - - - - - - - - - - - - - N P K K K Q R R V K E Q D F A G D M D
pt008225_POPTR_    A K A R S K R S R A A P G N W A S R L L V L S P T T S S S D T E I I A G P T P H P N S G K K T I K V E A R Q K K R D G G
 
AT4G32890.1     V D C G E S G G G R R C L H C A T E K T P Q W R T G P M G P K T L C N A C G V R Y K S G R L V P E Y R P A S S P T F V M
pt008225_POPTR_    V - - - E G C D G R K C L H C A T D K T P Q W R T G P M G P K T L C N A C G V R Y K S G R L V P E Y R P A A S P T F M L
 
AT4G32890.1     A R H S N S H R K V M E L R R Q K E M - - - R D E H L L S Q L - - R C E N L L M D I R S N G E D F L M H N N T N H V A P
pt008225_POPTR_    T K H S N S H R K V L E L R R Q K E M V R A Q Q Q H Q H Q Q F L H H H Q N M V F G V S N G G D D Y L I H - - - Q H V G P
 
AT4G32890.1     D F R H L I
pt008225_POPTR_    D F R Q M I
 
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