fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G32890.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt005578 not found in 357aa AT5G25830.1 not_not 0.413988657 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G32890.1     MEKIAPELFLVA----------------------GNPDSFVVDDLLDFSNDDGEVDDGLN
pt005578_POPTR_ ME--APELYGTTGFCSSQFTSNEKHHSLDSNKSIGGGDHFIVEDLLDFSNED---EDAMV
                **  ****: .:                      *. * *:*:*******:*   :*.: 

AT4G32890.1     TLP----------DSSTLSTGTLTDSSNSSSLF-TDGTGFS----DLYIPNDDIAELEWL
pt005578_POPTR_ TDPSNNNIVTPTTNSTDSSTVTFVDSCNSSSFSGCEPSGFNGDIGELCVPYDDLAELEWL
                * *          :*:  ** *:.**.****:   : :**.    :* :* **:******

AT4G32890.1     SNFVEESFAGEDQDKLHLFSGLKNPQTTGSTLTHLIKPEPELDHQFIDIDESNV------
pt005578_POPTR_ SNFVEESFSSEDLQRLQLISGMKARPDESSETRHF---------QSDDNNNGNVSNICNN
                ********:.** ::*:*:**:*     .*   *:         *  * ::.**      

AT4G32890.1     --------AVPAKARSKRSRSAASTWASRLLSLADSDET-------------NPKKKQRR
pt005578_POPTR_ NTMFNPEMAVPAKARSKRSRAAPGNWASRLLVLSRTTSSSEPEIIPGSTQHPNSGKKTIK
                        ************:*...****** *: : .:             *. **  :

AT4G32890.1     ----VKEQDFAGDMDVDCGESGGGRRCLHCATEKTPQWRTGPMGPKTLCNACGVRYKSGR
pt005578_POPTR_ GAVGLKKRD--GDV-----EGGDGRKCLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGR
                    :*::*  **:     *.*.**:******:***************************

AT4G32890.1     LVPEYRPASSPTFVMARHSNSHRKVMELRRQKEM---RDEHLLSQL--RCENLLMDIRSN
pt005578_POPTR_ LVPEYRPAASPTFMLTKHSNSHRKVLELRRQKEMVRAQQQHQHHQYLHHHQNMVFDVSNG
                ********:****::::********:********   :::*   *   : :*:::*: ..

AT4G32890.1     GEDFLMHNNTNHVAPDFRHLI
pt005578_POPTR_ GDDYLIH---QHVGPDFRRMI
                *:*:*:*   :**.****::*
BoxShade v3.31 C (beta, 970507) Output
AT4G32890.1     M E K I A P E L F L V A - - - - - - - - - - - - - - - - - - - - - - G N P D S F V V D D L L D F S N D D G E V D D G L N
pt005578_POPTR_    M E - - A P E L Y G T T G F C S S Q F T S N E K H H S L D S N K S I G G G D H F I V E D L L D F S N E D - - - E D A M V
 
AT4G32890.1     T L P - - - - - - - - - - D S S T L S T G T L T D S S N S S S L F - T D G T G F S - - - - D L Y I P N D D I A E L E W L
pt005578_POPTR_    T D P S N N N I V T P T T N S T D S S T V T F V D S C N S S S F S G C E P S G F N G D I G E L C V P Y D D L A E L E W L
 
AT4G32890.1     S N F V E E S F A G E D Q D K L H L F S G L K N P Q T T G S T L T H L I K P E P E L D H Q F I D I D E S N V - - - - - -
pt005578_POPTR_    S N F V E E S F S S E D L Q R L Q L I S G M K A R P D E S S E T R H F - - - - - - - - - Q S D D N N N G N V S N I C N N
 
AT4G32890.1     - - - - - - - - A V P A K A R S K R S R S A A S T W A S R L L S L A D S D E T - - - - - - - - - - - - - N P K K K Q R R
pt005578_POPTR_    N T M F N P E M A V P A K A R S K R S R A A P G N W A S R L L V L S R T T S S S E P E I I P G S T Q H P N S G K K T I K
 
AT4G32890.1     - - - - V K E Q D F A G D M D V D C G E S G G G R R C L H C A T E K T P Q W R T G P M G P K T L C N A C G V R Y K S G R
pt005578_POPTR_    G A V G L K K R D - - G D V - - - - - E G G D G R K C L H C A T D K T P Q W R T G P M G P K T L C N A C G V R Y K S G R
 
AT4G32890.1     L V P E Y R P A S S P T F V M A R H S N S H R K V M E L R R Q K E M - - - R D E H L L S Q L - - R C E N L L M D I R S N
pt005578_POPTR_    L V P E Y R P A A S P T F M L T K H S N S H R K V L E L R R Q K E M V R A Q Q Q H Q H H Q Y L H H H Q N M V F D V S N G
 
AT4G32890.1     G E D F L M H N N T N H V A P D F R H L I
pt005578_POPTR_    G D D Y L I H - - - Q H V G P D F R R M I
 
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