fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G34000.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt022077 not found in 424aa AT3G19290.1 1st_not 0.473988439 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G34000.2     MGSRLNFKSFVDGVSEQQPTVGTS---LPLTRQNSVFSLTFDEFQNSWGGGIGKDFGSMN
pt022077_POPTR_ MDSHWDFKNFGNA-SPGQGSVRKSPENPPLVRQSSVYSLTFDEFQNTWGGGLQKDFGSMN
                *.*: :**.* :. *  * :* .*    **.**.**:*********:****: *******

AT4G34000.2     MDELLKNIWTAEESHSMMGNNTSYTNISNGNSGNTVINGGGNNIGGLAVGVGGESGGFFT
pt022077_POPTR_ MDELLKNIWTAEETQAM-------TN---------------------TVGVGGE--GSTP
                *************:::*       **                     :******  *  .

AT4G34000.2     GGSLQRQGSLTLPRTISQKRVDDVWKELMKEDDIGNGVVNGGTSGIPQRQQTLGEMTLEE
pt022077_POPTR_ DGNLQRQGSLTLPRTLSQKTVDEVWRDLIKETSGGAG------SNLPQRQQTLREMTLEE
                .*.************:*** **:**::*:** . * *      *.:******* ******

AT4G34000.2     FLVRAGVVREEPQPVESVTNFNGGFYG------------------------FGSNGGLGT
pt022077_POPTR_ FLVRAGVVREDTQQIGRPN--NSGFFGELSQLNTNNNNNNTTGLALGFQQPNGNNGLMGT
                **********:.* :   .  *.**:*                         *.** :**

AT4G34000.2     A--SNGFVANQPQDLSGNGVAVRQDLLTAQTQPLQMQQPQMVQQPQMVQQPQQLIQTQER
pt022077_POPTR_ GIMENNLVSNQPSSLALNVGGIRPS--------------------QQLPQPQQ----QQP
                .  .*.:*:***..*: *  .:* .                    * : ****    *: 

AT4G34000.2     PFPK-QTTIAFSNTVDVVNRSQPATQCQEVKPSILGIHNHPMNNNLLQAVDF------KT
pt022077_POPTR_ LFPKPAATVVFASPLHVANNVQLAS--PGVRGSVVGIANRSVNNGLAHSRGMGMVSLAAR
                 ***  :*:.*:..:.*.*. * *:    *: *::** *:.:**.* :: .:        

AT4G34000.2     GVTVAAVSPGSQMSPDLTPKSALD-ASLSPVPYMFGRVRKTGAVLEKVIERRQKRMIKNR
pt022077_POPTR_ GVTVATESPANRISPDVIAKSNADTSSLSPVPFVFSRGRKPSAALEKVVERRQRRMIKNR
                *****: **..::***: .**  * :******::*.* **..*.****:****:******

AT4G34000.2     ESAARSRARKQAYTMELEAEIAQLKELNEELQKKQVEIMEKQKNQLLEPLRQPWGMGCKR
pt022077_POPTR_ ESAARSRARKQAYTLELEDEVAKLKELNKELQRKQAEIFEMQKNQFLETMKAQW--GGKR
                **************:*** *:*:*****:***:**.**:* ****:**.::  *  * **

AT4G34000.2     QCLRRTLTGPW
pt022077_POPTR_ QCLRRTLTGPW
                ***********
BoxShade v3.31 C (beta, 970507) Output
AT4G34000.2     M G S R L N F K S F V D G V S E Q Q P T V G T S - - - L P L T R Q N S V F S L T F D E F Q N S W G G G I G K D F G S M N
pt022077_POPTR_    M D S H W D F K N F G N A - S P G Q G S V R K S P E N P P L V R Q S S V Y S L T F D E F Q N T W G G G L Q K D F G S M N
 
AT4G34000.2     M D E L L K N I W T A E E S H S M M G N N T S Y T N I S N G N S G N T V I N G G G N N I G G L A V G V G G E S G G F F T
pt022077_POPTR_    M D E L L K N I W T A E E T Q A M - - - - - - - T N - - - - - - - - - - - - - - - - - - - - - T V G V G G E - - G S T P
 
AT4G34000.2     G G S L Q R Q G S L T L P R T I S Q K R V D D V W K E L M K E D D I G N G V V N G G T S G I P Q R Q Q T L G E M T L E E
pt022077_POPTR_    D G N L Q R Q G S L T L P R T L S Q K T V D E V W R D L I K E T S G G A G - - - - - - S N L P Q R Q Q T L R E M T L E E
 
AT4G34000.2     F L V R A G V V R E E P Q P V E S V T N F N G G F Y G - - - - - - - - - - - - - - - - - - - - - - - - F G S N G G L G T
pt022077_POPTR_    F L V R A G V V R E D T Q Q I G R P N - - N S G F F G E L S Q L N T N N N N N N T T G L A L G F Q Q P N G N N G L M G T
 
AT4G34000.2     A - - S N G F V A N Q P Q D L S G N G V A V R Q D L L T A Q T Q P L Q M Q Q P Q M V Q Q P Q M V Q Q P Q Q L I Q T Q E R
pt022077_POPTR_    G I M E N N L V S N Q P S S L A L N V G G I R P S - - - - - - - - - - - - - - - - - - - - Q Q L P Q P Q Q - - - - Q Q P
 
AT4G34000.2     P F P K - Q T T I A F S N T V D V V N R S Q P A T Q C Q E V K P S I L G I H N H P M N N N L L Q A V D F - - - - - - K T
pt022077_POPTR_    L F P K P A A T V V F A S P L H V A N N V Q L A S - - P G V R G S V V G I A N R S V N N G L A H S R G M G M V S L A A R
 
AT4G34000.2     G V T V A A V S P G S Q M S P D L T P K S A L D - A S L S P V P Y M F G R V R K T G A V L E K V I E R R Q K R M I K N R
pt022077_POPTR_    G V T V A T E S P A N R I S P D V I A K S N A D T S S L S P V P F V F S R G R K P S A A L E K V V E R R Q R R M I K N R
 
AT4G34000.2     E S A A R S R A R K Q A Y T M E L E A E I A Q L K E L N E E L Q K K Q V E I M E K Q K N Q L L E P L R Q P W G M G C K R
pt022077_POPTR_    E S A A R S R A R K Q A Y T L E L E D E V A K L K E L N K E L Q R K Q A E I F E M Q K N Q F L E T M K A Q W - - G G K R
 
AT4G34000.2     Q C L R R T L T G P W
pt022077_POPTR_    Q C L R R T L T G P W
 
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