fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G34410.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb023377 not found in 354aa AT4G34410.1 1st_1st 0.267326732 Ib
Pt004790 not found in 268aa AT4G34410.1 1st_1st 0.316831683 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G34410.1     -----------------MHYPNNRTEFVG------APAPTRYQKE-----QLSPEQELSV
Sb023377_Sorbi1 MTKKLISAMAGKQGFKEQQFNDQRRQQASIQGDDIAKSLVGFGGGGGR--LISHEQEDAI
pt004790_POPTR_ -----------------MQRPSKRSKIGE------APAATLFSPPGISPMRLTPDQESAV
                                  :  .:* :         * : . :         :: :** ::

AT4G34410.1     IVSALQHVISGENETAPCQGFSS-------------------DSTVISAGMPRLDSDTCQ
Sb023377_Sorbi1 IVAALRHVVSGYSTPPP-------------------------EVVTVAGGEP------CG
pt004790_POPTR_ MVAALRNVVSGTSSTDFSREFNSLNVPITTSYSQFGSRSSNGNGFCISIWPPSSDLDMCA
                :*:**::*:** . .                           :   ::   *      * 

AT4G34410.1     VCRIEGCLGCNYFF--AP--NQRIEKNHQQEEEITSSSNRRRESSPVAKKAEGG--GKIR
Sb023377_Sorbi1 VCGIDGCLGCD-FFGAAPELTQQEAVNFGTGQMVATA----------AAAAAGGEHGQRT
pt004790_POPTR_ VCKIKGCLGCN-FF--PP--NQEDKKDDKKG-----------------------------
                ** *.*****: **  .*  .*.   :                                 

AT4G34410.1     KRKNKKNGYRGVRQRPWGKFAAEIRDPKRATRVWLGTFETAEDAARAYDRAAIGFRGPRA
Sb023377_Sorbi1 RRRRKKNMYRGVRQRPWGKWAAEIRDPRRAARVWLGTFDTAEEAARAYDCAAIEFRGARA
pt004790_POPTR_ KRKRVKKNYRGVRQRPWGKWAAEIRDPRRAARVWLGTFSTAEEAARAYDKAAIDFRGPRA
                :*:. *: ***********:*******:**:*******.***:****** *** ***.**

AT4G34410.1     KLNFPFVDYTSSVSSPVAADDIGAKASASASVSATDS-------------VEAEQW----
Sb023377_Sorbi1 KLNFPGHEALLPFQGHGHGGDACATAAANAETQTTPMLMTPSPCSADAAAAAPGDWQLGG
pt004790_POPTR_ KLNFPFPD--SGISSFEESKEKQEEQAKQQEISEKKSGFEAE------MGKESEFW----
                *****  :    ...   . :     : . . . .                 .  *    

AT4G34410.1     --NGGGGDCNMEEWMNMMMMMDFGNGDSSD------SGNTIADMFQ--
Sb023377_Sorbi1 GVDGGEGD---EVW--EGLLQDLMKQDEADLWFLPFSGAASSF-----
pt004790_POPTR_ --DKIGDD-EIHEW--MMMMLDFSNGDSSD------STGTESAATIGI
                  :   .*   . *    :: *: : *.:*      *  : :
BoxShade v3.31 C (beta, 970507) Output
AT4G34410.1     - - - - - - - - - - - - - - - - - M H Y P N N R T E F V G - - - - - - A P A P T R Y Q K E - - - - - Q L S P E Q E L S V
Sb023377_Sorbi1    M T K K L I S A M A G K Q G F K E Q Q F N D Q R R Q Q A S I Q G D D I A K S L V G F G G G G G R - - L I S H E Q E D A I
pt004790_POPTR_    - - - - - - - - - - - - - - - - - M Q R P S K R S K I G E - - - - - - A P A A T L F S P P G I S P M R L T P D Q E S A V
 
AT4G34410.1     I V S A L Q H V I S G E N E T A P C Q G F S S - - - - - - - - - - - - - - - - - - - D S T V I S A G M P R L D S D T C Q
Sb023377_Sorbi1    I V A A L R H V V S G Y S T P P P - - - - - - - - - - - - - - - - - - - - - - - - - E V V T V A G G E P - - - - - - C G
pt004790_POPTR_    M V A A L R N V V S G T S S T D F S R E F N S L N V P I T T S Y S Q F G S R S S N G N G F C I S I W P P S S D L D M C A
 
AT4G34410.1     V C R I E G C L G C N Y F F - - A P - - N Q R I E K N H Q Q E E E I T S S S N R R R E S S P V A K K A E G G - - G K I R
Sb023377_Sorbi1    V C G I D G C L G C D - F F G A A P E L T Q Q E A V N F G T G Q M V A T A - - - - - - - - - - A A A A A G G E H G Q R T
pt004790_POPTR_    V C K I K G C L G C N - F F - - P P - - N Q E D K K D D K K G - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT4G34410.1     K R K N K K N G Y R G V R Q R P W G K F A A E I R D P K R A T R V W L G T F E T A E D A A R A Y D R A A I G F R G P R A
Sb023377_Sorbi1    R R R R K K N M Y R G V R Q R P W G K W A A E I R D P R R A A R V W L G T F D T A E E A A R A Y D C A A I E F R G A R A
pt004790_POPTR_    K R K R V K K N Y R G V R Q R P W G K W A A E I R D P R R A A R V W L G T F S T A E E A A R A Y D K A A I D F R G P R A
 
AT4G34410.1     K L N F P F V D Y T S S V S S P V A A D D I G A K A S A S A S V S A T D S - - - - - - - - - - - - - V E A E Q W - - - -
Sb023377_Sorbi1    K L N F P G H E A L L P F Q G H G H G G D A C A T A A A N A E T Q T T P M L M T P S P C S A D A A A A A P G D W Q L G G
pt004790_POPTR_    K L N F P F P D - - S G I S S F E E S K E K Q E E Q A K Q Q E I S E K K S G F E A E - - - - - - M G K E S E F W - - - -
 
AT4G34410.1     - - N G G G G D C N M E E W M N M M M M M D F G N G D S S D - - - - - - S G N T I A D M F Q - -
Sb023377_Sorbi1    G V D G G E G D - - - E V W - - E G L L Q D L M K Q D E A D L W F L P F S G A A S S F - - - - -
pt004790_POPTR_    - - D K I G D D - E I H E W - - M M M M L D F S N G D S S D - - - - - - S T G T E S A A T I G I
 
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