fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G34410.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt004790 not found in 268aa AT4G34410.1 1st_1st 0.316831683 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G34410.1     MHYPNNRTEFVGAPAPTRYQKE-----QLSPEQELSVIVSALQHVISGENETAPCQGFSS
pt004790_POPTR_ MQRPSKRSKIGEAPAATLFSPPGISPMRLTPDQESAVMVAALRNVVSGTSSTDFSREFNS
                *: *.:*:::  ***.* :.       :*:*:** :*:*:**::*:** ..*  .: *.*

AT4G34410.1     -------------------DSTVISAGMPRLDSDTCQVCRIEGCLGCNYFFAPNQRIEKN
pt004790_POPTR_ LNVPITTSYSQFGSRSSNGNGFCISIWPPSSDLDMCAVCKIKGCLGCN-FFPPNQEDKKD
                                   :.  **   *  * * * **:*:****** **.***. :*:

AT4G34410.1     HQQEEEITSSSNRRRESSPVAKKAEGGGKIRKRKNKKNGYRGVRQRPWGKFAAEIRDPKR
pt004790_POPTR_ DKKG---------------------------KRKRVKKNYRGVRQRPWGKWAAEIRDPRR
                .::                            ***. *:.***********:*******:*

AT4G34410.1     ATRVWLGTFETAEDAARAYDRAAIGFRGPRAKLNFPFVDYTSSVSSPVAADDIGAKASAS
pt004790_POPTR_ AARVWLGTFSTAEEAARAYDKAAIDFRGPRAKLNFPFPD--SGISSFEESKEKQEEQAKQ
                *:*******.***:******:***.************ *  *.:**   :.:   : : .

AT4G34410.1     ASVSATDS-------VEAEQWNGGGGDCNMEEWMNMMMMMDFGNGDSSDSGNTIADMFQ-
pt004790_POPTR_ QEISEKKSGFEAEMGKESEFWDKIGDD-EIHEW--MMMMLDFSNGDSSDSTGTESAATIG
                 .:* ..*        *:* *:  *.* ::.**  ****:**.******* .* :     

AT4G34410.1     -
pt004790_POPTR_ I
BoxShade v3.31 C (beta, 970507) Output
AT4G34410.1     M H Y P N N R T E F V G A P A P T R Y Q K E - - - - - Q L S P E Q E L S V I V S A L Q H V I S G E N E T A P C Q G F S S
pt004790_POPTR_    M Q R P S K R S K I G E A P A A T L F S P P G I S P M R L T P D Q E S A V M V A A L R N V V S G T S S T D F S R E F N S
 
AT4G34410.1     - - - - - - - - - - - - - - - - - - - D S T V I S A G M P R L D S D T C Q V C R I E G C L G C N Y F F A P N Q R I E K N
pt004790_POPTR_    L N V P I T T S Y S Q F G S R S S N G N G F C I S I W P P S S D L D M C A V C K I K G C L G C N - F F P P N Q E D K K D
 
AT4G34410.1     H Q Q E E E I T S S S N R R R E S S P V A K K A E G G G K I R K R K N K K N G Y R G V R Q R P W G K F A A E I R D P K R
pt004790_POPTR_    D K K G - - - - - - - - - - - - - - - - - - - - - - - - - - - K R K R V K K N Y R G V R Q R P W G K W A A E I R D P R R
 
AT4G34410.1     A T R V W L G T F E T A E D A A R A Y D R A A I G F R G P R A K L N F P F V D Y T S S V S S P V A A D D I G A K A S A S
pt004790_POPTR_    A A R V W L G T F S T A E E A A R A Y D K A A I D F R G P R A K L N F P F P D - - S G I S S F E E S K E K Q E E Q A K Q
 
AT4G34410.1     A S V S A T D S - - - - - - - V E A E Q W N G G G G D C N M E E W M N M M M M M D F G N G D S S D S G N T I A D M F Q -
pt004790_POPTR_    Q E I S E K K S G F E A E M G K E S E F W D K I G D D - E I H E W - - M M M M L D F S N G D S S D S T G T E S A A T I G
 
AT4G34410.1     -
pt004790_POPTR_    I
 
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