fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G34410.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb023377 not found in 354aa AT4G34410.1 1st_1st 0.267326732 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G34410.1     MHYPNNRTEFVGAPAPTRYQKEQ-------------------------------LSPEQE
Sb023377_Sorbi1 -----MTKKLISAMAGKQGFKEQQFNDQRRQQASIQGDDIAKSLVGFGGGGGRLISHEQE
                       .:::.* * .:  ***                               :* ***

AT4G34410.1     LSVIVSALQHVISGENETAPCQGFSSDSTVISAGMPRLDSDTCQVCRIEGCLGCNYFFAP
Sb023377_Sorbi1 DAIIVAALRHVVSGYSTPPP------EVVTVAGGEP------CGVCGIDGCLGCDFFGAA
                 ::**:**:**:** . ..*      : ..::.* *      * ** *:*****::* *.

AT4G34410.1     NQRIEKNHQQEEEITSSSNRRRESSPVAKKAEGG--GKIRKRKNKKNGYRGVRQRPWGKF
Sb023377_Sorbi1 PEL-----TQQEAVNFGTGQMVATAAAA--AAGGEHGQRTRRRRKKNMYRGVRQRPWGKW
                 :       *:* :. .:.:   ::..*  * **  *:  :*:.*** ***********:

AT4G34410.1     AAEIRDPKRATRVWLGTFETAEDAARAYDRAAIGFRGPRAKLNFPFVDYTSSVSSPVAAD
Sb023377_Sorbi1 AAEIRDPRRAARVWLGTFDTAEEAARAYDCAAIEFRGARAKLNFPGHEALLPFQGHGHGG
                *******:**:*******:***:****** *** ***.*******  :   ....   ..

AT4G34410.1     DIGAKASASASVSAT-----------DSVEAE--QW------NGGGGDCNMEEWMNMMMM
Sb023377_Sorbi1 DACATAAANAETQTTPMLMTPSPCSADAAAAAPGDWQLGGGVDGGEGD---EVWEG--LL
                *  *.*:*.*...:*           *:. *   :*      :** **   * * .  ::

AT4G34410.1     MDFGNGDSSD------SGNTIADMFQ
Sb023377_Sorbi1 QDLMKQDEADLWFLPFSG--AASSF-
                 *: : *.:*      **   *. *
BoxShade v3.31 C (beta, 970507) Output
AT4G34410.1     M H Y P N N R T E F V G A P A P T R Y Q K E Q - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - L S P E Q E
Sb023377_Sorbi1    - - - - - M T K K L I S A M A G K Q G F K E Q Q F N D Q R R Q Q A S I Q G D D I A K S L V G F G G G G G R L I S H E Q E
 
AT4G34410.1     L S V I V S A L Q H V I S G E N E T A P C Q G F S S D S T V I S A G M P R L D S D T C Q V C R I E G C L G C N Y F F A P
Sb023377_Sorbi1    D A I I V A A L R H V V S G Y S T P P P - - - - - - E V V T V A G G E P - - - - - - C G V C G I D G C L G C D F F G A A
 
AT4G34410.1     N Q R I E K N H Q Q E E E I T S S S N R R R E S S P V A K K A E G G - - G K I R K R K N K K N G Y R G V R Q R P W G K F
Sb023377_Sorbi1    P E L - - - - - T Q Q E A V N F G T G Q M V A T A A A A - - A A G G E H G Q R T R R R R K K N M Y R G V R Q R P W G K W
 
AT4G34410.1     A A E I R D P K R A T R V W L G T F E T A E D A A R A Y D R A A I G F R G P R A K L N F P F V D Y T S S V S S P V A A D
Sb023377_Sorbi1    A A E I R D P R R A A R V W L G T F D T A E E A A R A Y D C A A I E F R G A R A K L N F P G H E A L L P F Q G H G H G G
 
AT4G34410.1     D I G A K A S A S A S V S A T - - - - - - - - - - - D S V E A E - - Q W - - - - - - N G G G G D C N M E E W M N M M M M
Sb023377_Sorbi1    D A C A T A A A N A E T Q T T P M L M T P S P C S A D A A A A A P G D W Q L G G G V D G G E G D - - - E V W E G - - L L
 
AT4G34410.1     M D F G N G D S S D - - - - - - S G N T I A D M F Q
Sb023377_Sorbi1    Q D L M K Q D E A D L W F L P F S G - - A A S S F -
 
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