fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G34530.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm008525 not found in 398aa AT4G34530.1 1st_1st 0.310126582 Ib
Pt021960 not found in 440aa AT4G34530.1 1st_1st 0.332278481 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G34530.1     -----MNGAIGGDLLLNFPDMSVLERQRAHLKYLNP---------------TFD-SPLAG
pt021960_POPTR_ MINRALLPAGGGENMLHCTDITVLERQRACIKWQQEQQQQQQVQLQQQEISYFT--ELTG
gm008525_Glyma0 MLGYA-NPSG---NLAVDGDMTVLERQRARMKWQEEQE-------------YFSGNSFNG
                        :     :    *::******* :*: :                 *    : *

AT4G34530.1     FF-ADSSMI---------TGG-EMDSYLS------------TAGL-----NLPMMYG---
pt021960_POPTR_ VF-QQAGFH---------EGG--LSEVVT----RSV-KPD--PGLVDNGWNNDHVVGLGV
gm008525_Glyma0 VFSSSSSLHVPDSIMVAADSGCALAEVVAQAQPRSINKPSAAPGL---------------
                .*  .:.:           .*  : . ::             .**               

AT4G34530.1     ----------ETTVEGDSRLSISP-----------------------ETTLGTGNFKKRK
pt021960_POPTR_ GPLYDNGSGFELNYGAISRISSCPPAAVAAVAAATVKGSESVVSDKISSGVGRESSKKRK
gm008525_Glyma0 ----------HANSSSISRTFSCPPALVDPEPKPT------------DSSIGKDSFKKRK
                          . .  . **   .*                       .: :*  . ****

AT4G34530.1     FDTETKDCNEKKKKMTMNRDDLVEEGEEE-KSKITEQNNGSTKSIKKMKHK---AKKE--
pt021960_POPTR_ VD--NKQNNSKVDAEEDTRDKRIKGCAEEGESKITEKNN-NKNSRNNNTNKNNNSNKE--
gm008525_Glyma0 TD---KPHNPKVVAENENKDKRIKVGADDGESKITK-----CNTINTNTN-----NKETC
                 *   *  * *      .:*. ::   :: :****:      :: :. .:     :**  

AT4G34530.1     -ENNFSNDSSKVTKELEKTDYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGC
pt021960_POPTR_ SSAGNSKDNSKVT-EVQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGC
gm008525_Glyma0 TDTSNSKQNSKAS-E--KPDYIHVRARRGQATDSHSLAERVRREKISERMNYLQDLVPGC
                 . . *::.**.: *  *.*****************:*************::********

AT4G34530.1     DKITGKAGMLDEIINYVQSLQRQIEFLSMKLAIVNPRPDFDMDDIFAKEVASTPMTVVPS
pt021960_POPTR_ NKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNFDNLFARE-QAFPACSVNF
gm008525_Glyma0 NKVTGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFSMDDLFDKD--VFPTCAANF
                :*:********************:******** **** **.:*::* ::    *   .  

AT4G34530.1     PEMVLSGYSHEMVHSGYSSEMVNSGYLHVNPMQQ-------VNTSSDP------------
pt021960_POPTR_ PTIGM------------SSDMTNPAYLQFNPAQQQLVTCCGLDMGTDPPDMGLKRTTSSP
gm008525_Glyma0 PNIGMS---------STSSDITNPAYLPFN-SPQQIFQYDGLDTGINPSDVGLRRTISAP
                * : :            **::.*..** .*   *       :: . :*            

AT4G34530.1     ---------LSCFNNGEAPSMWDSHVQNLY-----------------------GNLGV--
pt021960_POPTR_ ESIPETFLDSSCFTQAHPPPAWDADLQNLYNVAFDQGRQTSFPTQPFTGSIEASNLKMEM
gm008525_Glyma0 VSMPETYLQSSCFTQMLPSSTWEGDFQNLCNFDVDQARATSFPSQLLSGLVEAGNLKMEM
                          ***.:  ... *:...***                        .** :
BoxShade v3.31 C (beta, 970507) Output
AT4G34530.1     - - - - - M N G A I G G D L L L N F P D M S V L E R Q R A H L K Y L N P - - - - - - - - - - - - - - - T F D - S P L A G
pt021960_POPTR_    M I N R A L L P A G G G E N M L H C T D I T V L E R Q R A C I K W Q Q E Q Q Q Q Q Q V Q L Q Q Q E I S Y F T - - E L T G
gm008525_Glyma0    M L G Y A - N P S G - - - N L A V D G D M T V L E R Q R A R M K W Q E E Q E - - - - - - - - - - - - - Y F S G N S F N G
 
AT4G34530.1     F F - A D S S M I - - - - - - - - - T G G - E M D S Y L S - - - - - - - - - - - - T A G L - - - - - N L P M M Y G - - -
pt021960_POPTR_    V F - Q Q A G F H - - - - - - - - - E G G - - L S E V V T - - - - R S V - K P D - - P G L V D N G W N N D H V V G L G V
gm008525_Glyma0    V F S S S S S L H V P D S I M V A A D S G C A L A E V V A Q A Q P R S I N K P S A A P G L - - - - - - - - - - - - - - -
 
AT4G34530.1     - - - - - - - - - - E T T V E G D S R L S I S P - - - - - - - - - - - - - - - - - - - - - - - E T T L G T G N F K K R K
pt021960_POPTR_    G P L Y D N G S G F E L N Y G A I S R I S S C P P A A V A A V A A A T V K G S E S V V S D K I S S G V G R E S S K K R K
gm008525_Glyma0    - - - - - - - - - - H A N S S S I S R T F S C P P A L V D P E P K P T - - - - - - - - - - - - D S S I G K D S F K K R K
 
AT4G34530.1     F D T E T K D C N E K K K K M T M N R D D L V E E G E E E - K S K I T E Q N N G S T K S I K K M K H K - - - A K K E - -
pt021960_POPTR_    V D - - N K Q N N S K V D A E E D T R D K R I K G C A E E G E S K I T E K N N - N K N S R N N N T N K N N N S N K E - -
gm008525_Glyma0    T D - - - K P H N P K V V A E N E N K D K R I K V G A D D G E S K I T K - - - - - C N T I N T N T N - - - - - N K E T C
 
AT4G34530.1     - E N N F S N D S S K V T K E L E K T D Y I H V R A R R G Q A T D S H S I A E R V R R E K I S E R M K F L Q D L V P G C
pt021960_POPTR_    S S A G N S K D N S K V T - E V Q K P D Y I H V R A R R G Q A T D S H S L A E R V R R E K I S E R M K Y L Q D L V P G C
gm008525_Glyma0    T D T S N S K Q N S K A S - E - - K P D Y I H V R A R R G Q A T D S H S L A E R V R R E K I S E R M N Y L Q D L V P G C
 
AT4G34530.1     D K I T G K A G M L D E I I N Y V Q S L Q R Q I E F L S M K L A I V N P R P D F D M D D I F A K E V A S T P M T V V P S
pt021960_POPTR_    N K I T G K A G M L D E I I N Y V Q S L Q R Q V E F L S M K L A A V N P R L D F N F D N L F A R E - Q A F P A C S V N F
gm008525_Glyma0    N K V T G K A G M L D E I I N Y V Q S L Q R Q V E F L S M K L A A V N P R L D F S M D D L F D K D - - V F P T C A A N F
 
AT4G34530.1     P E M V L S G Y S H E M V H S G Y S S E M V N S G Y L H V N P M Q Q - - - - - - - V N T S S D P - - - - - - - - - - - -
pt021960_POPTR_    P T I G M - - - - - - - - - - - - S S D M T N P A Y L Q F N P A Q Q Q L V T C C G L D M G T D P P D M G L K R T T S S P
gm008525_Glyma0    P N I G M S - - - - - - - - - S T S S D I T N P A Y L P F N - S P Q Q I F Q Y D G L D T G I N P S D V G L R R T I S A P
 
AT4G34530.1     - - - - - - - - - L S C F N N G E A P S M W D S H V Q N L Y - - - - - - - - - - - - - - - - - - - - - - - G N L G V - -
pt021960_POPTR_    E S I P E T F L D S S C F T Q A H P P P A W D A D L Q N L Y N V A F D Q G R Q T S F P T Q P F T G S I E A S N L K M E M
gm008525_Glyma0    V S M P E T Y L Q S S C F T Q M L P S S T W E G D F Q N L C N F D V D Q A R A T S F P S Q L L S G L V E A G N L K M E M
 
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