fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G34530.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt021960 not found in 440aa AT4G34530.1 1st_1st 0.332278481 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G34530.1     -MNGAI----GGDLLLNFPDMSVLERQRAHLKYLNP--------------TFDSPLAGFF
pt021960_POPTR_ MINRALLPAGGGENMLHCTDITVLERQRACIKWQQEQQQQQQVQLQQQEISYFTELTGVF
                 :* *:    **: :*: .*::******* :*: :               :: : *:*.*

AT4G34530.1     ADSSMITGG---------EMDSYLSTAGLN------------------LPMMYG------
pt021960_POPTR_ QQAGFHEGGLSEVVTRSVKPDPGLVDNGWNNDHVVGLGVGPLYDNGSGFELNYGAISRIS
                 ::.:  **         : *. *   * *                  : : **      

AT4G34530.1     -----------ETTVEGDSRLSISPETTLGTG--NFKKRKFDTETKDCNEKKKKMTMNRD
pt021960_POPTR_ SCPPAAVAAVAAATVKG-SESVVSDKISSGVGRESSKKRKVD--NKQNNSKVDAEEDTRD
                            :**:* *.  :* : : *.*  . ****.*  .*: *.* .    .**

AT4G34530.1     DLV----EEGEEEKSKITEQNNGS---TKSIKKMKHKAKKEENNFSNDSSKVTKELEKTD
pt021960_POPTR_ KRIKGCAEEGE---SKITEKNNNKNSRNNNTNKNNNSNKESSAGNSKDNSKVT-EVQKPD
                . :    ****   *****:**..   .:. :* ::. *:.. . *:*.**** *::*.*

AT4G34530.1     YIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSL
pt021960_POPTR_ YIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSL
                ****************:**************:********:*******************

AT4G34530.1     QRQIEFLSMKLAIVNPRPDFDMDDIFAKEVASTPMTVVPSPEMVLSGYSHEMVHSGYSSE
pt021960_POPTR_ QRQVEFLSMKLAAVNPRLDFNFDNLFAREQA-FPACSVNFPTI------------GMSSD
                ***:******** **** **::*::**:* *  *   *  * :            * **:

AT4G34530.1     MVNSGYLHVNPMQQ-------VNTSSDP---------------------LSCFNNGEAPS
pt021960_POPTR_ MTNPAYLQFNPAQQQLVTCCGLDMGTDPPDMGLKRTTSSPESIPETFLDSSCFTQAHPPP
                *.*..**:.** **       :: .:**                      ***.:...*.

AT4G34530.1     MWDSHVQNLY-----------------------GNLGV--
pt021960_POPTR_ AWDADLQNLYNVAFDQGRQTSFPTQPFTGSIEASNLKMEM
                 **:.:****                       .** :
BoxShade v3.31 C (beta, 970507) Output
AT4G34530.1     - M N G A I - - - - G G D L L L N F P D M S V L E R Q R A H L K Y L N P - - - - - - - - - - - - - - T F D S P L A G F F
pt021960_POPTR_    M I N R A L L P A G G G E N M L H C T D I T V L E R Q R A C I K W Q Q E Q Q Q Q Q Q V Q L Q Q Q E I S Y F T E L T G V F
 
AT4G34530.1     A D S S M I T G G - - - - - - - - - E M D S Y L S T A G L N - - - - - - - - - - - - - - - - - - L P M M Y G - - - - - -
pt021960_POPTR_    Q Q A G F H E G G L S E V V T R S V K P D P G L V D N G W N N D H V V G L G V G P L Y D N G S G F E L N Y G A I S R I S
 
AT4G34530.1     - - - - - - - - - - - E T T V E G D S R L S I S P E T T L G T G - - N F K K R K F D T E T K D C N E K K K K M T M N R D
pt021960_POPTR_    S C P P A A V A A V A A A T V K G - S E S V V S D K I S S G V G R E S S K K R K V D - - N K Q N N S K V D A E E D T R D
 
AT4G34530.1     D L V - - - - E E G E E E K S K I T E Q N N G S - - - T K S I K K M K H K A K K E E N N F S N D S S K V T K E L E K T D
pt021960_POPTR_    K R I K G C A E E G E - - - S K I T E K N N N K N S R N N N T N K N N N S N K E S S A G N S K D N S K V T - E V Q K P D
 
AT4G34530.1     Y I H V R A R R G Q A T D S H S I A E R V R R E K I S E R M K F L Q D L V P G C D K I T G K A G M L D E I I N Y V Q S L
pt021960_POPTR_    Y I H V R A R R G Q A T D S H S L A E R V R R E K I S E R M K Y L Q D L V P G C N K I T G K A G M L D E I I N Y V Q S L
 
AT4G34530.1     Q R Q I E F L S M K L A I V N P R P D F D M D D I F A K E V A S T P M T V V P S P E M V L S G Y S H E M V H S G Y S S E
pt021960_POPTR_    Q R Q V E F L S M K L A A V N P R L D F N F D N L F A R E Q A - F P A C S V N F P T I - - - - - - - - - - - - G M S S D
 
AT4G34530.1     M V N S G Y L H V N P M Q Q - - - - - - - V N T S S D P - - - - - - - - - - - - - - - - - - - - - L S C F N N G E A P S
pt021960_POPTR_    M T N P A Y L Q F N P A Q Q Q L V T C C G L D M G T D P P D M G L K R T T S S P E S I P E T F L D S S C F T Q A H P P P
 
AT4G34530.1     M W D S H V Q N L Y - - - - - - - - - - - - - - - - - - - - - - - G N L G V - -
pt021960_POPTR_    A W D A D L Q N L Y N V A F D Q G R Q T S F P T Q P F T G S I E A S N L K M E M
 
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