fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G34590.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm030618 not found in 166aa AT4G34590.1 not_1st 0.569169960 II
Gm008503 not found in 155aa AT4G34590.1 not_1st 0.545454545 II
Gm013715 not found in 138aa AT4G34590.1 not_1st 0.486166007 II
Gm020980 not found in 168aa AT4G34590.1 not_1st 0.482213438 II
Gm012562 not found in 163aa AT4G34590.1 not_1st 0.482213438 II
Pt036857 not found in 164aa AT4G34590.1 not_1st 0.490118577 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G34590.1     --MESS------SSGTTSSTIQTSSGSEESL---M-EQRKRKRMLSNRESARRSRMKKQK
gm012562_Glyma0 --MASPGGSGTYSSGSSS--LQ-NSGSEGDR-DIM-EQRKRKRMLSNRESARRSRIRKQQ
gm008503_Glyma0 --MACSSGT---SSGATSSMLQNNSGSEEELQALM-EQRKRKRMISNRESARRSRMRKQK
gm020980_Glyma0 --MASPGGSGTYSSGSSS--LQ-NSGSEGDR-DIM-EQRKRKRMLSNRESARRSRMRKQQ
gm030618_Glyma1 --MACSSGT---SSGSLS-LLQ-NSGSEEDLQAMMEDQRKRKRMISNRESARRSRMRKQK
pt036857_POPTR_ --MASSSGA---SSGSTT-MLR-NSSSEEDLQQVM-DLRKRKRMLSNRESARRSRVKKQK
gm013715_Glyma0 MTMACSSGT---SSGTSS-----------ELQGMM-DQRKRKRMISNRESARRSRMRKQK
                  * ..      ***: :           .    * : ******:**********::**:

AT4G34590.1     LLDDLTAQVNHLKKENTEIVTSVSITTQHYLTVEAENSVLRAQLDELNHRLQSLNDIIEF
gm012562_Glyma0 HLEGLSAQLDQLKKENAQINTNISITTQMYLNVEAENAILRAQMGELSNRLNSLNEMISF
gm008503_Glyma0 HLDDLASQVTQLRNENHQILTSVNLTTQKYLAVEAENSVLRAQVNELSHWLESLNEIIHF
gm020980_Glyma0 HLEGLSAQLDQLKKENTQMNTNIGISTQLYLNVEAENAILRAQMEELSKRLNSLNEMISL
gm030618_Glyma1 HLDDLVSQVAQLRKENQQILTSVNITTQQYLSVEAENSVLRAQVGELSHRLESLNEIVDV
pt036857_POPTR_ HLDDLMGQLGQLSKENNEILKRMNVTSQLYMNIEAENSILRAQMAELSHRLNSLNEIIEY
gm013715_Glyma0 HLDDLASQLTQLRSQNQQLLTSVNLTSHKYLAVEAENSVLRAQVNELSHRLDSLNQIIHL
                 *:.* .*: :* .:* :: . :.:::: *: :****::****: **.: *:***:::  

AT4G34590.1     LDS--SNNN---NNNNMGMCSNPLVGLECD---DFFV-NQMNMS-YIMNQPLMASSD---
gm012562_Glyma0 INS--TNNNCLMMFDEAQETTTQLFN-----DCGFMD-YAWN-G-IP----IMASADNEM
gm008503_Glyma0 LNA--TD-------GGPPPPPSSFFEPDA----TFFN-KAY------LSQPIMASAD---
gm020980_Glyma0 INSTTTTNNCL-MFDEAQETTTQLFN-----DCGFMD--AWNYG-IPLNQQIMAYADNDM
gm030618_Glyma1 LNA--TTTV----AGFGAAASSTFVEPMNNNNNSFFNFNPLNMG--YLNQPIMASAD---
pt036857_POPTR_ VHF--CSGTFERREDAAAPTTGAFGHQLVD---DFFM-NPWNNADFHLNKPIM---D---
gm013715_Glyma0 LN---------------------FFEPDAS-TSTFFN-NPFN-----FSLPIMASAD---
                :.                     :          *:               :*   *   

AT4G34590.1     ALMY
gm012562_Glyma0 LIMY
gm008503_Glyma0 MLQY
gm020980_Glyma0 LMMY
gm030618_Glyma1 ILQY
pt036857_POPTR_ MIMY
gm013715_Glyma0 MLQY
                 : *
BoxShade v3.31 C (beta, 970507) Output
AT4G34590.1     - - M E S S - - - - - - S S G T T S S T I Q T S S G S E E S L - - - M - E Q R K R K R M L S N R E S A R R S R M K K Q K
gm012562_Glyma0    - - M A S P G G S G T Y S S G S S S - - L Q - N S G S E G D R - D I M - E Q R K R K R M L S N R E S A R R S R I R K Q Q
gm008503_Glyma0    - - M A C S S G T - - - S S G A T S S M L Q N N S G S E E E L Q A L M - E Q R K R K R M I S N R E S A R R S R M R K Q K
gm020980_Glyma0    - - M A S P G G S G T Y S S G S S S - - L Q - N S G S E G D R - D I M - E Q R K R K R M L S N R E S A R R S R M R K Q Q
gm030618_Glyma1    - - M A C S S G T - - - S S G S L S - L L Q - N S G S E E D L Q A M M E D Q R K R K R M I S N R E S A R R S R M R K Q K
pt036857_POPTR_    - - M A S S S G A - - - S S G S T T - M L R - N S S S E E D L Q Q V M - D L R K R K R M L S N R E S A R R S R V K K Q K
gm013715_Glyma0    M T M A C S S G T - - - S S G T S S - - - - - - - - - - - E L Q G M M - D Q R K R K R M I S N R E S A R R S R M R K Q K
 
AT4G34590.1     L L D D L T A Q V N H L K K E N T E I V T S V S I T T Q H Y L T V E A E N S V L R A Q L D E L N H R L Q S L N D I I E F
gm012562_Glyma0    H L E G L S A Q L D Q L K K E N A Q I N T N I S I T T Q M Y L N V E A E N A I L R A Q M G E L S N R L N S L N E M I S F
gm008503_Glyma0    H L D D L A S Q V T Q L R N E N H Q I L T S V N L T T Q K Y L A V E A E N S V L R A Q V N E L S H W L E S L N E I I H F
gm020980_Glyma0    H L E G L S A Q L D Q L K K E N T Q M N T N I G I S T Q L Y L N V E A E N A I L R A Q M E E L S K R L N S L N E M I S L
gm030618_Glyma1    H L D D L V S Q V A Q L R K E N Q Q I L T S V N I T T Q Q Y L S V E A E N S V L R A Q V G E L S H R L E S L N E I V D V
pt036857_POPTR_    H L D D L M G Q L G Q L S K E N N E I L K R M N V T S Q L Y M N I E A E N S I L R A Q M A E L S H R L N S L N E I I E Y
gm013715_Glyma0    H L D D L A S Q L T Q L R S Q N Q Q L L T S V N L T S H K Y L A V E A E N S V L R A Q V N E L S H R L D S L N Q I I H L
 
AT4G34590.1     L D S - - S N N N - - - N N N N M G M C S N P L V G L E C D - - - D F F V - N Q M N M S - Y I M N Q P L M A S S D - - -
gm012562_Glyma0    I N S - - T N N N C L M M F D E A Q E T T T Q L F N - - - - - D C G F M D - Y A W N - G - I P - - - - I M A S A D N E M
gm008503_Glyma0    L N A - - T D - - - - - - - G G P P P P P S S F F E P D A - - - - T F F N - K A Y - - - - - - L S Q P I M A S A D - - -
gm020980_Glyma0    I N S T T T T N N C L - M F D E A Q E T T T Q L F N - - - - - D C G F M D - - A W N Y G - I P L N Q Q I M A Y A D N D M
gm030618_Glyma1    L N A - - T T T V - - - - A G F G A A A S S T F V E P M N N N N N S F F N F N P L N M G - - Y L N Q P I M A S A D - - -
pt036857_POPTR_    V H F - - C S G T F E R R E D A A A P T T G A F G H Q L V D - - - D F F M - N P W N N A D F H L N K P I M - - - D - - -
gm013715_Glyma0    L N - - - - - - - - - - - - - - - - - - - - - F F E P D A S - T S T F F N - N P F N - - - - - F S L P I M A S A D - - -
 
AT4G34590.1     A L M Y
gm012562_Glyma0    L I M Y
gm008503_Glyma0    M L Q Y
gm020980_Glyma0    L M M Y
gm030618_Glyma1    I L Q Y
pt036857_POPTR_    M I M Y
gm013715_Glyma0    M L Q Y
 
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