fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G34590.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt036857 not found in 164aa AT4G34590.1 not_1st 0.490118577 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G34590.1     MESSSSGTT-SSTIQTSSGSEESL---MEQRKRKRMLSNRESARRSRMKKQKLLDDLTAQ
pt036857_POPTR_ MASSSGASSGSTTMLRNSSSEEDLQQVMDLRKRKRMLSNRESARRSRVKKQKHLDDLMGQ
                * ***..:: *:*:  .*.***.*   *: *****************:**** **** .*

AT4G34590.1     VNHLKKENTEIVTSVSITTQHYLTVEAENSVLRAQLDELNHRLQSLNDIIEFL-------
pt036857_POPTR_ LGQLSKENNEILKRMNVTSQLYMNIEAENSILRAQMAELSHRLNSLNEIIEYVHFCSGTF
                :.:*.***.**:. :.:*:* *:.:*****:****: **.***:***:***::       

AT4G34590.1     DSSNNNNNNNMGMCSNPLVGLECDDFFVNQMNMS-YIMNQPLMASSDALMY
pt036857_POPTR_ ERREDAAAPTTGAFGHQLV----DDFFMNPWNNADFHLNKPIM---DMIMY
                :  ::    . *  .: **    ****:*  * : : :*:*:*   * :**
BoxShade v3.31 C (beta, 970507) Output
AT4G34590.1     M E S S S S G T T - S S T I Q T S S G S E E S L - - - M E Q R K R K R M L S N R E S A R R S R M K K Q K L L D D L T A Q
pt036857_POPTR_    M A S S S G A S S G S T T M L R N S S S E E D L Q Q V M D L R K R K R M L S N R E S A R R S R V K K Q K H L D D L M G Q
 
AT4G34590.1     V N H L K K E N T E I V T S V S I T T Q H Y L T V E A E N S V L R A Q L D E L N H R L Q S L N D I I E F L - - - - - - -
pt036857_POPTR_    L G Q L S K E N N E I L K R M N V T S Q L Y M N I E A E N S I L R A Q M A E L S H R L N S L N E I I E Y V H F C S G T F
 
AT4G34590.1     D S S N N N N N N N M G M C S N P L V G L E C D D F F V N Q M N M S - Y I M N Q P L M A S S D A L M Y
pt036857_POPTR_    E R R E D A A A P T T G A F G H Q L V - - - - D D F F M N P W N N A D F H L N K P I M - - - D M I M Y
 
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