fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G34590.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt000643 not found in 155aa AT1G75390.1 not_not 0.565217391 III
Pt019941 not found in 155aa AT1G75390.1 not_not 0.549407114 III
Pt037919 not found in 156aa AT1G75390.1 not_not 0.545454545 III
Pt001429 not found in 168aa AT2G18160.1 not_not 0.478260869 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G34590.1     MESSSSGTTSST-IQTSSGSEE----SLMEQRKRKRMLSNRESARRSRMKKQKLLDDLTA
pt000643_POPTR_ MASSSGDSSGFT-QLQNSGSEENTQMMLVDQRKRKRMQSNRESARRSRMKKQKHLDDLMA
pt001429_POPTR_ MASSSGASSGSTAMLRNSSSEEDPQ-QIMDLRKRKRMLSNRESARRSRMRKQKHLDDLTG
pt019941_POPTR_ MASSSGTSSGSS-LIQNSGSEEDLQ-ALMDQRKRKRMISNRESARRSRMRKQKHLDDLMA
pt037919_POPTR_ MASSSGNSSGST-QLQNSGSEE--QVVLVDQRKRKRMLSNRESARRSRMRKQKYLGDLMA
                * ***. ::. :    .*.***     ::: ****** ***********:*** *.** .

AT4G34590.1     QVNHLKKENTEIVTSVSITTQHYLTVEAENSVLRAQLDELNHRLQSLNDIIEFLDSSNN-
pt000643_POPTR_ QVTQLRKDNNQILTTINVTTQHYLNVEAENSILRAQMMELNHRLDSLNEILNYINTSNGI
pt001429_POPTR_ QLRQLARENNEILTRMNVISQLYMNIEAENSILRAQMAELTHRLDSLNEIIEYANFSDGL
pt019941_POPTR_ QVSQLRKENHQIITGINITTQRYLSVEADNSILRVQISELSNRLESLNEIIGSLNSNNGV
pt037919_POPTR_ QVAQLRTDNNQILTTINVTTQHFLNVEAENSILRAQMMELNHRLDSLNEILNYINTSNGI
                *: :*  :* :*:* :.: :* ::.:**:**:**.*: **.:**:***:*:   : .:. 

AT4G34590.1     -----NNNNNMGMCSNPLVGLECDDFFVNQMNMS-YIMNQPL--MASSDALMY-
pt000643_POPTR_ F--ENDHHEDL-----------PDHSFMNPSNLF--YLNQPI--MASPDLFQY-
pt001429_POPTR_ F-----EPEDAVASVSATSHQIGDGFFMNPWNNANSHVNQPIMDMVIDNLLMVC
pt019941_POPTR_ FGDSITFNEPA-----------AD-SFLNPWNMA--YLNQPI--MASAEMFHY-
pt037919_POPTR_ F--EIDHHEDLQT--------SADHGFMNPLNLI--YLNQPI--MASPDLFQY-
                        :              *  *:*  *     :***:  *.  : :
BoxShade v3.31 C (beta, 970507) Output
AT4G34590.1     M E S S S S G T T S S T - I Q T S S G S E E - - - - S L M E Q R K R K R M L S N R E S A R R S R M K K Q K L L D D L T A
pt000643_POPTR_    M A S S S G D S S G F T - Q L Q N S G S E E N T Q M M L V D Q R K R K R M Q S N R E S A R R S R M K K Q K H L D D L M A
pt001429_POPTR_    M A S S S G A S S G S T A M L R N S S S E E D P Q - Q I M D L R K R K R M L S N R E S A R R S R M R K Q K H L D D L T G
pt019941_POPTR_    M A S S S G T S S G S S - L I Q N S G S E E D L Q - A L M D Q R K R K R M I S N R E S A R R S R M R K Q K H L D D L M A
pt037919_POPTR_    M A S S S G N S S G S T - Q L Q N S G S E E - - Q V V L V D Q R K R K R M L S N R E S A R R S R M R K Q K Y L G D L M A
 
AT4G34590.1     Q V N H L K K E N T E I V T S V S I T T Q H Y L T V E A E N S V L R A Q L D E L N H R L Q S L N D I I E F L D S S N N -
pt000643_POPTR_    Q V T Q L R K D N N Q I L T T I N V T T Q H Y L N V E A E N S I L R A Q M M E L N H R L D S L N E I L N Y I N T S N G I
pt001429_POPTR_    Q L R Q L A R E N N E I L T R M N V I S Q L Y M N I E A E N S I L R A Q M A E L T H R L D S L N E I I E Y A N F S D G L
pt019941_POPTR_    Q V S Q L R K E N H Q I I T G I N I T T Q R Y L S V E A D N S I L R V Q I S E L S N R L E S L N E I I G S L N S N N G V
pt037919_POPTR_    Q V A Q L R T D N N Q I L T T I N V T T Q H F L N V E A E N S I L R A Q M M E L N H R L D S L N E I L N Y I N T S N G I
 
AT4G34590.1     - - - - - N N N N N M G M C S N P L V G L E C D D F F V N Q M N M S - Y I M N Q P L - - M A S S D A L M Y -
pt000643_POPTR_    F - - E N D H H E D L - - - - - - - - - - - P D H S F M N P S N L F - - Y L N Q P I - - M A S P D L F Q Y -
pt001429_POPTR_    F - - - - - E P E D A V A S V S A T S H Q I G D G F F M N P W N N A N S H V N Q P I M D M V I D N L L M V C
pt019941_POPTR_    F G D S I T F N E P A - - - - - - - - - - - A D - S F L N P W N M A - - Y L N Q P I - - M A S A E M F H Y -
pt037919_POPTR_    F - - E I D H H E D L Q T - - - - - - - - S A D H G F M N P L N L I - - Y L N Q P I - - M A S P D L F Q Y -
 
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