fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G34590.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt020822 not found in 155aa AT4G34590.1 1st_1st 0.584980237 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G34590.1     MESSSSGTTSSTIQTSSGSEE---SLMEQRKRKRMLSNRESARRSRMKKQKLLDDLTAQV
pt020822_POPTR_ MASSSGTSSGSSLIQNSGSEENLQALMDQRKRKRMISNRESARRSRMRKQKHLDDLVAQV
                * ***. ::.*::  .*****   :**:*******:***********:*** ****.***

AT4G34590.1     NHLKKENTEIVTSVSITTQHYLTVEAENSVLRAQLDELNHRLQSLNDIIEFLDSSNNNNN
pt020822_POPTR_ AQLKKENHQIITSINITTQHYLNVEADNSILRAQVSELSHRLEFLNGIISLLNSSN----
                 :***** :*:**:.*******.***:**:****:.**.***: **.**.:*:***    

AT4G34590.1     NNMGMCSNPLVGLE-CDDFFVNQMNMSYIMNQPLMASSDALMY
pt020822_POPTR_ ---GLFGDSSIFNEPAADSFLNPFNMSY-LNQPISASADMFQY
                   *: .:. :  * . * *:* :**** :***: **:* : *
BoxShade v3.31 C (beta, 970507) Output
AT4G34590.1     M E S S S S G T T S S T I Q T S S G S E E - - - S L M E Q R K R K R M L S N R E S A R R S R M K K Q K L L D D L T A Q V
pt020822_POPTR_    M A S S S G T S S G S S L I Q N S G S E E N L Q A L M D Q R K R K R M I S N R E S A R R S R M R K Q K H L D D L V A Q V
 
AT4G34590.1     N H L K K E N T E I V T S V S I T T Q H Y L T V E A E N S V L R A Q L D E L N H R L Q S L N D I I E F L D S S N N N N N
pt020822_POPTR_    A Q L K K E N H Q I I T S I N I T T Q H Y L N V E A D N S I L R A Q V S E L S H R L E F L N G I I S L L N S S N - - - -
 
AT4G34590.1     N N M G M C S N P L V G L E - C D D F F V N Q M N M S Y I M N Q P L M A S S D A L M Y
pt020822_POPTR_    - - - G L F G D S S I F N E P A A D S F L N P F N M S Y - L N Q P I S A S A D M F Q Y
 
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